3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02063

Details:

PFam ID : PF02063

PFam Domain Description : MARCKS family

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 35

Average sequence length: 165.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02063	B7UG60_ECO27_1_39	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02063	E2QZM4_CANFA_2_263	97.0

Sequence based PCA Plot of the family - PF02063 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay