3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02027

Details:

PFam ID : PF02027

PFam Domain Description : RolB/RolC glucosidase family

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 65

Average sequence length: 186.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02027	Q9ZS36_TOBAC_1_145	90

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02027	TR2M_AGRT4_11_197	100

Sequence based PCA Plot of the family - PF02027 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay