3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02024

Details:

PFam ID : PF02024

PFam Domain Description : Leptin

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 37

Average sequence length: 118.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02024	B7PH15_IXOSC_1_54	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02024	D6BP01_SALSA_24_170	100

Sequence based PCA Plot of the family - PF02024 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay