3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02005 Details: PFam ID : PF02005 PFam Domain Description : N2,N2-dimethylguanosine tRNA methyltransferase Number of Sequence in 50% Dataset : 135 Number of Sequence in Full Dataset : 438 Average sequence length: 310.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02005A4FVL8_DANRE_1_20976.8 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02005D8LF74_ECTSI_86_627100 Sequence based PCA Plot of the family - PF02005 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=31 Length=8Motif2 Start=1 Length=8Motif3 Start=22 Length=8Motif4 Start=80 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02005
PFam Domain Description : N2,N2-dimethylguanosine tRNA methyltransferase
Number of Sequence in 50% Dataset : 135
Number of Sequence in Full Dataset : 438
Average sequence length: 310.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER