3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01809 Details: PFam ID : PF01809 PFam Domain Description : Haemolytic domain Number of Sequence in 50% Dataset : 15 Number of Sequence in Full Dataset : 1074 Average sequence length: 66.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01809B9TDU0_RICCO_2_7021.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01809D9PJI6_9ZZZZ_32_11299.7 Sequence based PCA Plot of the family - PF01809 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=1 Length=19Motif2 Start=33 Length=8Motif3 Start=58 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF01809
PFam Domain Description : Haemolytic domain
Number of Sequence in 50% Dataset : 15
Number of Sequence in Full Dataset : 1074
Average sequence length: 66.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER