3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01795

Details:

PFam ID : PF01795

PFam Domain Description : MraW methylase family

Number of Sequence in 50% Dataset : 97

Number of Sequence in Full Dataset : 1355

Average sequence length: 294.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01795	D7FXR7_ECTSI_2_159	76.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01795	C6T7T5_SOYBN_82_135	100

Sequence based PCA Plot of the family - PF01795 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=16 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay