3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01763

Details:

PFam ID : PF01763

PFam Domain Description : Herpesvirus UL6 like

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 52

Average sequence length: 443.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01763	B7TQ06_9BETA_62_614	71.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01763	B7TQ06_9BETA_62_614	100

Sequence based PCA Plot of the family - PF01763 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=38

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay