3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01607 Details: PFam ID : PF01607 PFam Domain Description : Chitin binding Peritrophin-A domain Number of Sequence in 50% Dataset : 599 Number of Sequence in Full Dataset : 3769 Average sequence length: 53.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01607A8DUW3_NEMVE_82_162100 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01607P91818_TACTR_20_9099.9 Sequence based PCA Plot of the family - PF01607 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=25 Length=8Motif2 Start=12 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF01607
PFam Domain Description : Chitin binding Peritrophin-A domain
Number of Sequence in 50% Dataset : 599
Number of Sequence in Full Dataset : 3769
Average sequence length: 53.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER