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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01607
Details:

PFam ID : PF01607

PFam Domain Description : Chitin binding Peritrophin-A domain

Number of Sequence in 50% Dataset : 599

Number of Sequence in Full Dataset : 3769

Average sequence length: 53.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01607A8DUW3_NEMVE_82_162100
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01607P91818_TACTR_20_9099.9
Sequence based PCA Plot of the family - PF01607 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=25 Length=8
Motif2 Start=12 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay