3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01555

Details:

PFam ID : PF01555

PFam Domain Description : DNA methylase

Number of Sequence in 50% Dataset : 630

Number of Sequence in Full Dataset : 2701

Average sequence length: 228.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01555	C6NY59_9GAMM_41_473	80.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01555	D2MJK2_9BACT_35_151	99.9

Sequence based PCA Plot of the family - PF01555 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=157 Length=8
Motif2 Start=118 Length=8
Motif3 Start=138 Length=11
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay