3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01415 Details: PFam ID : PF01415 PFam Domain Description : Interleukin 7/9 family Number of Sequence in 50% Dataset : 10 Number of Sequence in Full Dataset : 21 Average sequence length: 99.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01415F1PA28_CANFA_1_9611.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01415B1Q4W1_MERUN_22_7555 Sequence based PCA Plot of the family - PF01415 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=36 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF01415
PFam Domain Description : Interleukin 7/9 family
Number of Sequence in 50% Dataset : 10
Number of Sequence in Full Dataset : 21
Average sequence length: 99.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER