3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01372

Details:

PFam ID : PF01372

PFam Domain Description : Melittin

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 9

Average sequence length: 20.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01372	C6YRZ3_FRATT_6_93	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01372	E3SZK2_9NEOB_46_67	100

Sequence based PCA Plot of the family - PF01372 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay