3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01370

Details:

PFam ID : PF01370

PFam Domain Description : NAD dependent epimerase/dehydratase family

Number of Sequence in 50% Dataset : 0

Number of Sequence in Full Dataset : 13650

Average sequence length: 230.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01370	C0SAI7_PARBP_340_396	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01370	Q7R737_PLAYO_175_224	58

Sequence based PCA Plot of the family - PF01370 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay