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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01284
Details:

PFam ID : PF01284

PFam Domain Description : Membrane-associating domain

Number of Sequence in 50% Dataset : 204

Number of Sequence in Full Dataset : 723

Average sequence length: 143.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01284Q4PDQ4_USTMA_48_21021.6
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01284E4XUS2_OIKDI_35_24681
Sequence based PCA Plot of the family - PF01284 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=9 Length=42
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay