3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01284 Details: PFam ID : PF01284 PFam Domain Description : Membrane-associating domain Number of Sequence in 50% Dataset : 204 Number of Sequence in Full Dataset : 723 Average sequence length: 143.0 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01284Q4PDQ4_USTMA_48_21021.6 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF01284E4XUS2_OIKDI_35_24681 Sequence based PCA Plot of the family - PF01284 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 1 motifsMotif1 Start=9 Length=42 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF01284
PFam Domain Description : Membrane-associating domain
Number of Sequence in 50% Dataset : 204
Number of Sequence in Full Dataset : 723
Average sequence length: 143.0
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER