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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01242
Details:

PFam ID : PF01242

PFam Domain Description : 6-pyruvoyl tetrahydropterin synthase

Number of Sequence in 50% Dataset : 164

Number of Sequence in Full Dataset : 1268

Average sequence length: 128.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01242B8CNQ0_SHEPW_20_7892.6
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF01242D5GV61_9CAUD_7_198100
Sequence based PCA Plot of the family - PF01242 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=8 Length=17
Motif2 Start=61 Length=17
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay