3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00967

Details:

PFam ID : PF00967

PFam Domain Description : Barwin family

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 66

Average sequence length: 101.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00967	C5Y4T4_SORBI_37_91	58.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00967	Q5YB45_APIGR_1_42	100

Sequence based PCA Plot of the family - PF00967 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay