3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00930

Details:

PFam ID : PF00930

PFam Domain Description : Dipeptidyl peptidase IV (DPP IV) N-terminal region

Number of Sequence in 50% Dataset : 300

Number of Sequence in Full Dataset : 955

Average sequence length: 301.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00930	E4RTN3_LEAB4_256_538	90.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00930	C6PQU2_9CLOT_146_312	99.5

Sequence based PCA Plot of the family - PF00930 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=73 Length=8
Motif2 Start=47 Length=8
Motif3 Start=19 Length=8
Motif4 Start=58 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay