3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00903

Details:

PFam ID : PF00903

PFam Domain Description : Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

Number of Sequence in 50% Dataset : 577

Number of Sequence in Full Dataset : 4154

Average sequence length: 127.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00903	Q123A0_POLSJ_8_103	93.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00903	Q15SC6_PSEA6_34_176	97.8

Sequence based PCA Plot of the family - PF00903 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=8
Motif2 Start=17 Length=18
Motif3 Start=111 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay