3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00891

Details:

PFam ID : PF00891

PFam Domain Description : O-methyltransferase

Number of Sequence in 50% Dataset : 559

Number of Sequence in Full Dataset : 1700

Average sequence length: 218.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00891	Q5BAN2_EMENI_248_339	91.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00891	D8T9K0_SELML_89_196	100

Sequence based PCA Plot of the family - PF00891 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=62 Length=8
Motif3 Start=136 Length=8
Motif4 Start=158 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay