3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00851 Details: PFam ID : PF00851 PFam Domain Description : Helper component proteinase Number of Sequence in 50% Dataset : 27 Number of Sequence in Full Dataset : 115 Average sequence length: 364.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00851D0VYB9_BAYMV_124_25565.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00851Q82933_9POTV_245_698100 Sequence based PCA Plot of the family - PF00851 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=68 Length=11Motif2 Start=282 Length=8Motif3 Start=117 Length=17Motif4 Start=90 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00851
PFam Domain Description : Helper component proteinase
Number of Sequence in 50% Dataset : 27
Number of Sequence in Full Dataset : 115
Average sequence length: 364.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER