3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00797

Details:

PFam ID : PF00797

PFam Domain Description : N-acetyltransferase

Number of Sequence in 50% Dataset : 208

Number of Sequence in Full Dataset : 512

Average sequence length: 226.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00797	A0BK95_PARTE_28_144	87.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00797	D2VPH5_NAEGR_30_320	100

Sequence based PCA Plot of the family - PF00797 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=67 Length=8
Motif2 Start=11 Length=8
Motif3 Start=133 Length=11
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay