3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00791

Details:

PFam ID : PF00791

PFam Domain Description : ZU5 domain

Number of Sequence in 50% Dataset : 49

Number of Sequence in Full Dataset : 151

Average sequence length: 97.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00791	F2YLG0_BRAFL_126_203	58.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00791	C4Q552_SCHMA_1094_1203	100

Sequence based PCA Plot of the family - PF00791 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=36 Length=8
Motif2 Start=27 Length=8
Motif3 Start=72 Length=8
Motif4 Start=18 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay