3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00781

Details:

PFam ID : PF00781

PFam Domain Description : Diacylglycerol kinase catalytic domain

Number of Sequence in 50% Dataset : 583

Number of Sequence in Full Dataset : 2267

Average sequence length: 128.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00781	A4BXC4_9FLAO_1_52	98.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00781	Q4DVD8_TRYCR_112_313	100

Sequence based PCA Plot of the family - PF00781 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=20 Length=8
Motif2 Start=2 Length=17
Motif3 Start=70 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay