3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00772

Details:

PFam ID : PF00772

PFam Domain Description : DnaB-like helicase N terminal domain

Number of Sequence in 50% Dataset : 292

Number of Sequence in Full Dataset : 1458

Average sequence length: 100.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00772	C6XGW8_LIBAP_11_68	96.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00772	Q70K59_9ACTO_29_138	100

Sequence based PCA Plot of the family - PF00772 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=8 Length=17
Motif2 Start=27 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay