3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00751

Details:

PFam ID : PF00751

PFam Domain Description : DM DNA binding domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 138

Average sequence length: 43.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00751	B7QIZ0_IXOSC_1_25	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00751	E7DCA4_9PIPI_11_37	100

Sequence based PCA Plot of the family - PF00751 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=19 Length=8
Motif2 Start=5 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay