3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00668 Details: PFam ID : PF00668 PFam Domain Description : Condensation domain Number of Sequence in 50% Dataset : 3335 Number of Sequence in Full Dataset : 8277 Average sequence length: 278.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00668C7YLB5_NECH7_732_92792.7 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00668Q97DC4_CLOAB_180_284100 Sequence based PCA Plot of the family - PF00668 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=29Motif2 Start=43 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00668
PFam Domain Description : Condensation domain
Number of Sequence in 50% Dataset : 3335
Number of Sequence in Full Dataset : 8277
Average sequence length: 278.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER