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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00668
Details:

PFam ID : PF00668

PFam Domain Description : Condensation domain

Number of Sequence in 50% Dataset : 3335

Number of Sequence in Full Dataset : 8277

Average sequence length: 278.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00668C7YLB5_NECH7_732_92792.7
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00668Q97DC4_CLOAB_180_284100
Sequence based PCA Plot of the family - PF00668 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=29
Motif2 Start=43 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay