3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00610

Details:

PFam ID : PF00610

PFam Domain Description : Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)

Number of Sequence in 50% Dataset : 151

Number of Sequence in Full Dataset : 610

Average sequence length: 72.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00610	C1EDB3_MICSR_162_234	74.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00610	D3B8P4_POLPA_20_118	100

Sequence based PCA Plot of the family - PF00610 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=13 Length=41

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay