3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00497 Details: PFam ID : PF00497 PFam Domain Description : Bacterial extracellular solute-binding proteins, family 3 Number of Sequence in 50% Dataset : 2826 Number of Sequence in Full Dataset : 8854 Average sequence length: 222.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00497Q313D3_DESDG_50_21086.5 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00497E3EYI3_KETVY_112_26699.7 Sequence based PCA Plot of the family - PF00497 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=225 Length=8Motif2 Start=3 Length=8Motif3 Start=24 Length=8Motif4 Start=43 Length=17 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00497
PFam Domain Description : Bacterial extracellular solute-binding proteins, family 3
Number of Sequence in 50% Dataset : 2826
Number of Sequence in Full Dataset : 8854
Average sequence length: 222.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER