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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00497
Details:

PFam ID : PF00497

PFam Domain Description : Bacterial extracellular solute-binding proteins, family 3

Number of Sequence in 50% Dataset : 2826

Number of Sequence in Full Dataset : 8854

Average sequence length: 222.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00497Q313D3_DESDG_50_21086.5
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00497E3EYI3_KETVY_112_26699.7
Sequence based PCA Plot of the family - PF00497 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=225 Length=8
Motif2 Start=3 Length=8
Motif3 Start=24 Length=8
Motif4 Start=43 Length=17
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay