3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00484 Details: PFam ID : PF00484 PFam Domain Description : Carbonic anhydrase Number of Sequence in 50% Dataset : 171 Number of Sequence in Full Dataset : 1713 Average sequence length: 148.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00484C4PXV2_SCHMA_33_24185.8 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00484B2IT09_NOSP7_8_11299.8 Sequence based PCA Plot of the family - PF00484 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=1 Length=8Motif2 Start=20 Length=18Motif3 Start=48 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00484
PFam Domain Description : Carbonic anhydrase
Number of Sequence in 50% Dataset : 171
Number of Sequence in Full Dataset : 1713
Average sequence length: 148.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER