3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00353

Details:

PFam ID : PF00353

PFam Domain Description : Hemolysin-type calcium-binding repeat (2 copies)

Number of Sequence in 50% Dataset : 6030

Number of Sequence in Full Dataset : 19755

Average sequence length: 17.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00353	A7AR08_BABBO_176_233	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00353	B2B3Y6_PODAN_116_212	100

Sequence based PCA Plot of the family - PF00353 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8