3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00337 Details: PFam ID : PF00337 PFam Domain Description : Galactoside-binding lectin Number of Sequence in 50% Dataset : 172 Number of Sequence in Full Dataset : 670 Average sequence length: 132.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00337Q7LZ67_RANCA_1_5386.5 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00337A9TKI2_PHYPA_159_361100 Sequence based PCA Plot of the family - PF00337 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=45 Length=8Motif2 Start=1 Length=11Motif3 Start=194 Length=8Motif4 Start=146 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00337
PFam Domain Description : Galactoside-binding lectin
Number of Sequence in 50% Dataset : 172
Number of Sequence in Full Dataset : 670
Average sequence length: 132.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER