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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00337
Details:

PFam ID : PF00337

PFam Domain Description : Galactoside-binding lectin

Number of Sequence in 50% Dataset : 172

Number of Sequence in Full Dataset : 670

Average sequence length: 132.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00337Q7LZ67_RANCA_1_5386.5
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00337A9TKI2_PHYPA_159_361100
Sequence based PCA Plot of the family - PF00337 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=45 Length=8
Motif2 Start=1 Length=11
Motif3 Start=194 Length=8
Motif4 Start=146 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay