3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00300 Details: PFam ID : PF00300 PFam Domain Description : Histidine phosphatase superfamily (branch 1) Number of Sequence in 50% Dataset : 1675 Number of Sequence in Full Dataset : 7058 Average sequence length: 151.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00300Q0UWC3_PHANO_1_11198.9 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00300F1L883_ASCSU_3_10199.9 Sequence based PCA Plot of the family - PF00300 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=3 Length=20Motif2 Start=30 Length=11Motif3 Start=264 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00300
PFam Domain Description : Histidine phosphatase superfamily (branch 1)
Number of Sequence in 50% Dataset : 1675
Number of Sequence in Full Dataset : 7058
Average sequence length: 151.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER