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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00300
Details:

PFam ID : PF00300

PFam Domain Description : Histidine phosphatase superfamily (branch 1)

Number of Sequence in 50% Dataset : 1675

Number of Sequence in Full Dataset : 7058

Average sequence length: 151.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00300Q0UWC3_PHANO_1_11198.9
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00300F1L883_ASCSU_3_10199.9
Sequence based PCA Plot of the family - PF00300 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=3 Length=20
Motif2 Start=30 Length=11
Motif3 Start=264 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay