3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00244

Details:

PFam ID : PF00244

PFam Domain Description : 14-3-3 protein

Number of Sequence in 50% Dataset : 78

Number of Sequence in Full Dataset : 445

Average sequence length: 179.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00244	A2DKA1_TRIVA_6_228	79.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00244	Q013W8_OSTTA_25_270	100

Sequence based PCA Plot of the family - PF00244 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=39 Length=8
Motif2 Start=26 Length=8
Motif3 Start=13 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay