3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00220 Details: PFam ID : PF00220 PFam Domain Description : Neurohypophysial hormones, N-terminal Domain Number of Sequence in 50% Dataset : 19 Number of Sequence in Full Dataset : 19 Average sequence length: 8.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00220B3EXH5_9LABR_20_2838.8 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00220B3EXH5_9LABR_20_28100 Sequence based PCA Plot of the family - PF00220 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 1 motifsMotif1 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00220
PFam Domain Description : Neurohypophysial hormones, N-terminal Domain
Number of Sequence in 50% Dataset : 19
Number of Sequence in Full Dataset : 19
Average sequence length: 8.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER