3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00201

Details:

PFam ID : PF00201

PFam Domain Description : UDP-glucoronosyl and UDP-glucosyl transferase

Number of Sequence in 50% Dataset : 650

Number of Sequence in Full Dataset : 4315

Average sequence length: 272.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00201	Q4RC78_TETNG_1_32	82.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00201	CRTX_ESCVU_4_137	99.9

Sequence based PCA Plot of the family - PF00201 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=32 Length=8
Motif2 Start=1 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay