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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00164
Details:

PFam ID : PF00164

PFam Domain Description : Ribosomal protein S12

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 766

Average sequence length: 121.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00164A8NT45_BRUMA_1_3710
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00164C5L1C9_9ALVE_53_11797.9
Sequence based PCA Plot of the family - PF00164 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=5 Length=27
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay