3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00164 Details: PFam ID : PF00164 PFam Domain Description : Ribosomal protein S12 Number of Sequence in 50% Dataset : 11 Number of Sequence in Full Dataset : 766 Average sequence length: 121.0 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00164A8NT45_BRUMA_1_3710 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00164C5L1C9_9ALVE_53_11797.9 Sequence based PCA Plot of the family - PF00164 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 1 motifsMotif1 Start=5 Length=27 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00164
PFam Domain Description : Ribosomal protein S12
Number of Sequence in 50% Dataset : 11
Number of Sequence in Full Dataset : 766
Average sequence length: 121.0
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER