3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00067

Details:

PFam ID : PF00067

PFam Domain Description : Cytochrome P450

Number of Sequence in 50% Dataset : 5314

Number of Sequence in Full Dataset : 18654

Average sequence length: 319.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00067	Q9AUD8_PSIGU_92_439	74.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00067	Q3C2E0_MACFA_1_113	99.8

Sequence based PCA Plot of the family - PF00067 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=11 Length=8
Motif2 Start=34 Length=8
Motif3 Start=498 Length=8
Motif4 Start=2 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay