3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00051

Details:

PFam ID : PF00051

PFam Domain Description : Kringle domain

Number of Sequence in 50% Dataset : 91

Number of Sequence in Full Dataset : 739

Average sequence length: 75.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00051	C4Q9J0_SCHMA_84_180	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00051	C4Q9J0_SCHMA_84_180	100

Sequence based PCA Plot of the family - PF00051 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=40

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay