3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00031

Details:

PFam ID : PF00031

PFam Domain Description : Cystatin domain

Number of Sequence in 50% Dataset : 173

Number of Sequence in Full Dataset : 811

Average sequence length: 87.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00031	E9HFE4_DAPPU_4_58	76.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00031	F1KVP6_ASCSU_26_136	100

Sequence based PCA Plot of the family - PF00031 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay