3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00014

Details:

PFam ID : PF00014

PFam Domain Description : Kunitz/Bovine pancreatic trypsin inhibitor domain

Number of Sequence in 50% Dataset : 157

Number of Sequence in Full Dataset : 1854

Average sequence length: 53.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00014	B5M722_AMBAM_48_111	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00014	Q4PMV4_IXOSC_212_283	100

Sequence based PCA Plot of the family - PF00014 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=10 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay