Superfamily : 89623 [ Ribose/Galactose isomerase RpiB/AlsB ]
Class : Alpha and beta proteins (a/b)
Fold : Ribose/Galactose isomerase RpiB/AlsB
# of Members : 6
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d3k7pa-  (   1 )     mtrrVAIGTdhpAfaihenLilYVkeAgdeFvpvycGPkta-esvdypd
d3sdwa-  (   6 )    lpplrLAIACddaGvsyKeaLkahLs-nplVssitdVgVtsttdktayph
d4em8a1  (   2 )       vrVfLSSDhaGveLRlfLSayLrdlg--ceVfdcgCdpe-hsvdypd
d4lfla-  (   1 )       mdVIIGAdkdGfamKeqVkkyLeehq--yrVadv-tpep-ae-dfve
d4lflb-  (   1 )       miIAIGNdhiVTmqKieIsnmLkdmg--ytVideGtydt-hrthypi
d6mu0a1  (   2 )      sfnIfIASdhtGltLKkiISehLktkq--fnVvdlGpnyfdanddypd
                        bbbbbb  33aaaaaaaaaaaaa     bbbb           aaa

                             60        70        80        90        100 
d3k7pa-  (  49 )    fAsrVAemVarkeVeFGVLAagsGigMsiaAnkvpgVrAalChdhytAam
d3sdwa-  (  56 )    VAiqAAqlikdg-vdrALMICgtGlgVaisAnkVpgIrAvtahdtfsVer
d4em8a1  (  48 )    yVhdVVreVs---tSfGVLICgtGigMsiaAnrhknIrAalCsst-lAkl
d4lfla-  (  43 )    SSlaVTkkLlnsdAhKAIMFDryGvgSamaSnkvkgMvTavVeeentAhm
d4lflb-  (  45 )    yGkkVAeDVadgrAdlGIVMCgtGigIStaAdknegIrAamCddvtsAvy
d6mu0a1  (  48 )    fAflVAdkVkknsddlGILI-gtGvgVcmaAnkvkgVlAalVvsk-tAal
                    aaaaaaaaaa     bbbbbb   aaaaaaa       bbb      aaa

                             110       120       130       140       150 
d3k7pa-  (  99 )    SRihndAnIVCVGerttgvevIreIIitFLqtpfsgeerHvrriekirai
d3sdwa-  ( 106 )    AIlsndAqVLCFGqrvIgielAkrLAgeWLtyrFdqksasa-kvqaisdy
d4em8a1  (  96 )    srehndANVLCFGsryIdpdtAqsVLytFMttaflgg-rhavrvqklge 
d4lfla-  (  93 )    TAehngAkAIAIGtgiTgydrAlvIIqrYLdteyagg-rHqirldmlekm
d4lflb-  (  95 )    AreqlnAnVLGIGGavVgvhlIqdIVkaYLdatyketpeNkklidkidni
d6mu0a1  (  99 )    ArqhdnAnVLCLSSrfvtdseNikIVddFLkanfegg-rHqrrIdkiiry
                    aaa     bbbbb     aaaaaaaaaaaaa         aaaaaaaa  

                             160       170      
d3k7pa-  ( 149 )    easha                       
d3sdwa-  ( 156 )    ekkfvevn                    
d4em8a1                                         
d4lfla-  ( 142 )    i                           
d4lflb-  ( 145 )    akpnpdqkdnphffdaelekwaegvyhd
d6mu0a1  ( 148 )    eket
 

 

Domain IDNameFamilySourceDomainSTRING-DB
automated matchesautomated matchesTrypanosoma cruzi [TaxId: 353153]view
automated matchesautomated matchesCoccidioides immitis [TaxId: 246410]view
automated matchesautomated matchesAnaplasma phagocytophilum [TaxId: 212042]view
automated matchesautomated matchesLactobacillus rhamnosus [TaxId: 568704]view
automated matchesautomated matchesLactobacillus rhamnosus [TaxId: 568704]view
automated matchesautomated matchesMycoplasma genitalium [TaxId: 243273]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170
- M T R R V A I G T D H P A F A I H E N L I L Y V K E A G D E F V P V Y C G P K T A - E S V D Y P D F A S R V A E M V A R K E V E F G V L A A G S G I G M S I A A N K V P G V R A A L C H D H Y T A A M S R I H N D A N I V C V G E R T T G V E V I R E I I I T F L Q T P F S G E E R H V R R I E K I R A I E A S H A - - - - - - - - - - - - - - - - - - - - - - -
L P P L R L A I A C D D A G V S Y K E A L K A H L S - N P L V S S I T D V G V T S T T D K T A Y P H V A I Q A A Q L I K D G - V D R A L M I C G T G L G V A I S A N K V P G I R A V T A H D T F S V E R A I L S N D A Q V L C F G Q R V I G I E L A K R L A G E W L T Y R F D Q K S A S A - K V Q A I S D Y E K K F V E V N - - - - - - - - - - - - - - - - - - - -
- - - V R V F L S S D H A G V E L R L F L S A Y L R D L G - - C E V F D C G C D P E - H S V D Y P D Y V H D V V R E V S - - - T S F G V L I C G T G I G M S I A A N R H K N I R A A L C S S T - L A K L S R E H N D A N V L C F G S R Y I D P D T A Q S V L Y T F M T T A F L G G - R H A V R V Q K L G E - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - M D V I I G A D K D G F A M K E Q V K K Y L E E H Q - - Y R V A D V - T P E P - A E - D F V E S S L A V T K K L L N S D A H K A I M F D R Y G V G S A M A S N K V K G M V T A V V E E E N T A H M T A E H N G A K A I A I G T G I T G Y D R A L V I I Q R Y L D T E Y A G G - R H Q I R L D M L E K M I - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - M I I A I G N D H I V T M Q K I E I S N M L K D M G - - Y T V I D E G T Y D T - H R T H Y P I Y G K K V A E D V A D G R A D L G I V M C G T G I G I S T A A D K N E G I R A A M C D D V T S A V Y A R E Q L N A N V L G I G G A V V G V H L I Q D I V K A Y L D A T Y K E T P E N K K L I D K I D N I A K P N P D Q K D N P H F F D A E L E K W A E G V Y H D
- - S F N I F I A S D H T G L T L K K I I S E H L K T K Q - - F N V V D L G P N Y F D A N D D Y P D F A F L V A D K V K K N S D D L G I L I - G T G V G V C M A A N K V K G V L A A L V V S K - T A A L A R Q H D N A N V L C L S S R F V T D S E N I K I V D D F L K A N F E G G - R H Q R R I D K I I R Y E K E T - - - - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in