Superfamily : 89392 [ Prokaryotic lipoproteins and lipoprotein localization factors ]
Class : All beta proteins
Fold : LolA-like prokaryotic lipoproteins and lipoprotein localization factors
# of Members : 6
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d2byoa1  (  20 )      sdpallaeirqSldatkgltsvhvavrTtgkVdsllgitsadvdvran
d2w7qa-  (  13 )    gsiaiddsaavqrLtglLnkAqtLtArFsqltldgsgtrlqetaGqLsLk
d3ksna-  (   1 )            daasdLksRLdkvssFhAsFtqkvtd-----vqeGqGdLwVk
d3mh9a1  (  35 )    ggplpdAkpLveeAtaqTkaLkSAhmvltVngkIpgl-slktlsgdLttn
d3wjta-  (   9 )     pgkspdspqWrqhqqdVrnlnqYqTrGafaYisd--qqkvyarFfWqQt
d4qa8a-  (  52 )    gspspeAqqiLqdSskaTkglhsVhVvvtVnn-lstL-pfesvdAdVtnq
                            aaaaaaaaaaa   bbbbbbbbb        bbbbbbbbb  

                             60        70        80        90        100 
d2byoa1  (  68 )    ---plaakgvCtyn-----deqgVpfrvqgdniSVklf--ddwsnlgsis
d2w7qa-  (  63 )    rpg--lFrwhtdap-------neqlLiSng--Vwlyd-pdleqvtiql--
d3ksna-  (  43 )    rpn--lFnWhmtqp-------desilVSdgkTlwfyn-pfveqAtAtwLk
d3mh9a1  (  84 )    ---ptaAtgnwkltl--ggsdidadfvVfdgilYaTlt-pnqwsdfgpAa
d3wjta-  (  56 )    gq---rYrllLtnpdgs----teLeLnaqpgnVqLvd-nkgqrytaddAe
d4qa8a-  ( 100 )    pqgnGqAvgnakvrmkpntpVvatefLVtnktmytkrg--gdyvsvgpAe
                         bbbbbbb           bbbbbb  bbbbbb     bbbb    

                             110       120       130       140       150 
d2byoa1  ( 108 )    e---lstsrv---gvtqlLs--gVtnLqaqgtevIdgisTtkItgtipas
d2w7qa-  ( 102 )    d--rlt-----qTpALLLSgdIsisesfAItykeggnvvdFvLkpkt---
d3ksna-  (  83 )    d--atg-----ntpFMLIArNqs--sdWqynIkqngd--dFvLtpkas--
d3mh9a1  ( 128 )    diydpaqvLnpdtGLAnVLa--nFadAkaegrdtingqnTIrIsgkVsaq
d3wjta-  (  99 )    e--MIgkltgMpIPLnslrqWILGLpgdAtdykLddqyrLseItysqn--
d4qa8a-  ( 148 )    kiydPgiiLdkdrGLGAVVg--qVqnptiqgrdaidglaTVkVsgtIdAa
                                                 bbbbb     bbbbbb     

                             160       170       180       190       200 
d2byoa1  ( 155 )    sVkmldp--gak-sarpatvwIAqd------gshhlVrasIdLg-sgsiq
d2w7qa-  ( 145 )    -----------dtlFdtLrLs-Frs--------gkVndMqmidgvgqrtn
d3ksna-  ( 121 )    -----------ngnLkqFtIn-Vgr-------dGtIhqFSAveqddqrss
d3mh9a1  ( 176 )    AVnqiappFnat-qpVpAtVwIqet------gdhqLAqaqldrgsgnSvq
d3wjta-  ( 145 )    -----------g-knWkVvYggYdtktq----pAMPanMeLtdg-gqrIk
d4qa8a-  ( 196 )    vIdpIVpqLGkgggrlpItLwIVdtnastpapaanLVrMvIdkd-qgnVd
                                   bbbbbb b            bbbbbbb     bbb

                             210       220       230 
d2byoa1  ( 195 )    ltQskwn-epvnVd                 
d2w7qa-  ( 175 )    IlFfdvmnealdakqFtfdvppgvdviqe  
d3ksna-  ( 152 )    YqlksQqngavdaakFtftppqgvtvddqrk
d3mh9a1  ( 219 )    mtLskwg-ekVqVtkPpvs            
d3wjta-  ( 178 )    LkMdnWivk                      
d4qa8a-  ( 245 )    ItLsnwg-apvtipnpa-g            
                    bbbb
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Putative lipoprotein LppXLppX-likeMycobacterium tuberculosis [TaxId: 1773]view
automated matchesautomated matchesPseudomonas aeruginosa, PA01 [TaxId: 208964]view
Outer-membrane lipoproteins carrier protein LolAOuter-membrane lipoproteins carrier protein LolAEscherichia coli [TaxId: 562]view
automated matchesautomated matchesMycobacterium tuberculosis [TaxId: 83332]view
Outer membrane lipoprotein receptor LolBOuter membrane lipoprotein receptor LolBEscherichia coli [TaxId: 562]view
automated matchesautomated matchesMycobacterium bovis [TaxId: 233413]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
- - S D P A L L A E I R Q S L D A T K G L T S V H V A V R T T G K V D S L L G I T S A D V D V R A N - - - P L A A K G V C T Y N - - - - - D E Q G V P F R V Q G D N I S V K L F - - D D W S N L G S I S E - - - L S T S R V - - - G V T Q L L S - - G V T N L Q A Q G T E V I D G I S T T K I T G T I P A S S V K M L D P - - G A K - S A R P A T V W I A Q D - - - - - - G S H H L V R A S I D L G - S G S I Q L T Q S K W N - E P V N V D - - - - - - - - - - - - - - - - -
G S I A I D D S A A V Q R L T G L L N K A Q T L T A R F S Q L T L D G S G T R L Q E T A G Q L S L K R P G - - L F R W H T D A P - - - - - - - N E Q L L I S N G - - V W L Y D - P D L E Q V T I Q L - - D - - R L T - - - - - Q T P A L L L S G D I S I S E S F A I T Y K E G G N V V D F V L K P K T - - - - - - - - - - - - - - D T L F D T L R L S - F R S - - - - - - - - G K V N D M Q M I D G V G Q R T N I L F F D V M N E A L D A K Q F T F D V P P G V D V I Q E - -
- - - - - - - - D A A S D L K S R L D K V S S F H A S F T Q K V T D - - - - - V Q E G Q G D L W V K R P N - - L F N W H M T Q P - - - - - - - D E S I L V S D G K T L W F Y N - P F V E Q A T A T W L K D - - A T G - - - - - N T P F M L I A R N Q S - - S D W Q Y N I K Q N G D - - D F V L T P K A S - - - - - - - - - - - - - N G N L K Q F T I N - V G R - - - - - - - D G T I H Q F S A V E Q D D Q R S S Y Q L K S Q Q N G A V D A A K F T F T P P Q G V T V D D Q R K
G G P L P D A K P L V E E A T A Q T K A L K S A H M V L T V N G K I P G L - S L K T L S G D L T T N - - - P T A A T G N W K L T L - - G G S D I D A D F V V F D G I L Y A T L T - P N Q W S D F G P A A D I Y D P A Q V L N P D T G L A N V L A - - N F A D A K A E G R D T I N G Q N T I R I S G K V S A Q A V N Q I A P P F N A T - Q P V P A T V W I Q E T - - - - - - G D H Q L A Q A Q L D R G S G N S V Q M T L S K W G - E K V Q V T K P P V S - - - - - - - - - - - -
- P G K S P D S P Q W R Q H Q Q D V R N L N Q Y Q T R G A F A Y I S D - - Q Q K V Y A R F F W Q Q T G Q - - - R Y R L L L T N P D G S - - - - T E L E L N A Q P G N V Q L V D - N K G Q R Y T A D D A E E - - M I G K L T G M P I P L N S L R Q W I L G L P G D A T D Y K L D D Q Y R L S E I T Y S Q N - - - - - - - - - - - - - G - K N W K V V Y G G Y D T K T Q - - - - P A M P A N M E L T D G - G Q R I K L K M D N W I V K - - - - - - - - - - - - - - - - - - - - - -
G S P S P E A Q Q I L Q D S S K A T K G L H S V H V V V T V N N - L S T L - P F E S V D A D V T N Q P Q G N G Q A V G N A K V R M K P N T P V V A T E F L V T N K T M Y T K R G - - G D Y V S V G P A E K I Y D P G I I L D K D R G L G A V V G - - Q V Q N P T I Q G R D A I D G L A T V K V S G T I D A A V I D P I V P Q L G K G G G R L P I T L W I V D T N A S T P A P A A N L V R M V I D K D - Q G N V D I T L S N W G - A P V T I P N P A - G - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d2byoa1 A P9WK65 GO:0005319
d2byoa1 A P9WK65 GO:0005576
d2byoa1 A P9WK65 GO:0005886
d2byoa1 A P9WK65 GO:0006869
d2byoa1 A P9WK65 GO:0009274
d2byoa1 A P9WK65 GO:0009986
d2byoa1 A P9WK65 GO:0071770
d2byoa1 A P9WK65 GO:0005319
d2byoa1 A P9WK65 GO:0005576
d2byoa1 A P9WK65 GO:0005886
d2byoa1 A P9WK65 GO:0006869
d2byoa1 A P9WK65 GO:0009274
d2byoa1 A P9WK65 GO:0009986
d2byoa1 A P9WK65 GO:0071770
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in