PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1kzqa1  (   3 )    p-lvanqvvtÇpd-kksta-aviLtpt-enhFTLkÇpktAlTEPptLAys
d1kzqa2  ( 132 )    aSsvvnnvArÇsygadstlgpVkLsaegpttMtLvÇgkdGvkvPqdn---
                           bbb      bbb bbbb      bbbbb     bbb       

                             60        70        80        90        100 
d1kzqa1  (  49 )    pnRqIÇpagttssÇtskavtLsslIpeAedsWWtgdsasLdtaGIkLtVp
d1kzqa2  ( 179 )    --nqYÇsgttLtgç--neksFkdiLpkLtenPWqgnAss--dkGAtLtIk
                         b              333         bb          bbbb  

                             110       120       130  
d1kzqa1  (  99 )    iekFPvttqtFVVGÇikgddaq-SÇMVtVtVqar
d1kzqa2  ( 223 )    keAFPaesksViIGÇtGgspekhhÇtVkLeFag 
                            bbbbbbbb        bbbbbbb

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1kzqa1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1kzqa1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Major surface antigen p30, SAG1	Major surface antigen p30, SAG1	Toxoplasma gondii [TaxId: 5811]		view
d1kzqa2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1kzqa2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Major surface antigen p30, SAG1	Major surface antigen p30, SAG1	Toxoplasma gondii [TaxId: 5811]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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P	-	L	V	A	N	Q	V	V	T	C	P	D	-	K	K	S	T	A	-	A	V	I	L	T	P	T	-	E	N	H	F	T	L	K	C	P	K	T	A	L	T	E	P	P	T	L	A	Y	S	P	N	R	Q	I	C	P	A	G	T	T	S	S	C	T	S	K	A	V	T	L	S	S	L	I	P	E	A	E	D	S	W	W	T	G	D	S	A	S	L	D	T	A	G	I	K	L	T	V	P	I	E	K	F	P	V	T	T	Q	T	F	V	V	G	C	I	K	G	D	D	A	Q	-	S	C	M	V	T	V	T	V	Q	A	R
A	S	S	V	V	N	N	V	A	R	C	S	Y	G	A	D	S	T	L	G	P	V	K	L	S	A	E	G	P	T	T	M	T	L	V	C	G	K	D	G	V	K	V	P	Q	D	N	-	-	-	-	-	N	Q	Y	C	S	G	T	T	L	T	G	C	-	-	N	E	K	S	F	K	D	I	L	P	K	L	T	E	N	P	W	Q	G	N	A	S	S	-	-	D	K	G	A	T	L	T	I	K	K	E	A	F	P	A	E	S	K	S	V	I	I	G	C	T	G	G	S	P	E	K	H	H	C	T	V	K	L	E	F	A	G	-

Member	Chain	UniProtKB	GO term
d1kzqa1	A	P13664	GO:0016020
d1kzqa1	A	P13664	GO:0020003
d1kzqa1	A	P13664	GO:0016020
d1kzqa1	A	P13664	GO:0020003
d1kzqa2	A	P13664	GO:0016020
d1kzqa2	A	P13664	GO:0020003
d1kzqa2	A	P13664	GO:0016020
d1kzqa2	A	P13664	GO:0020003

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P	-	L	V	A	N	Q	V	V	T	C	P	D	-	K	K	S	T	A	-	A	V	I	L	T	P	T	-	E	N	H	F	T	L	K	C	P	K	T	A	L	T	E	P	P	T	L	A	Y	S	P	N	R	Q	I	C	P	A	G	T	T	S	S	C	T	S	K	A	V	T	L	S	S	L	I	P	E	A	E	D	S	W	W	T	G	D	S	A	S	L	D	T	A	G	I	K	L	T	V	P	I	E	K	F	P	V	T	T	Q	T	F	V	V	G	C	I	K	G	D	D	A	Q	-	S	C	M	V	T	V	T	V	Q	A	R
A	S	S	V	V	N	N	V	A	R	C	S	Y	G	A	D	S	T	L	G	P	V	K	L	S	A	E	G	P	T	T	M	T	L	V	C	G	K	D	G	V	K	V	P	Q	D	N	-	-	-	-	-	N	Q	Y	C	S	G	T	T	L	T	G	C	-	-	N	E	K	S	F	K	D	I	L	P	K	L	T	E	N	P	W	Q	G	N	A	S	S	-	-	D	K	G	A	T	L	T	I	K	K	E	A	F	P	A	E	S	K	S	V	I	I	G	C	T	G	G	S	P	E	K	H	H	C	T	V	K	L	E	F	A	G	-

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P	-	L	V	A	N	Q	V	V	T	C	P	D	-	K	K	S	T	A	-	A	V	I	L	T	P	T	-	E	N	H	F	T	L	K	C	P	K	T	A	L	T	E	P	P	T	L	A	Y	S	P	N	R	Q	I	C	P	A	G	T	T	S	S	C	T	S	K	A	V	T	L	S	S	L	I	P	E	A	E	D	S	W	W	T	G	D	S	A	S	L	D	T	A	G	I	K	L	T	V	P	I	E	K	F	P	V	T	T	Q	T	F	V	V	G	C	I	K	G	D	D	A	Q	-	S	C	M	V	T	V	T	V	Q	A	R
A	S	S	V	V	N	N	V	A	R	C	S	Y	G	A	D	S	T	L	G	P	V	K	L	S	A	E	G	P	T	T	M	T	L	V	C	G	K	D	G	V	K	V	P	Q	D	N	-	-	-	-	-	N	Q	Y	C	S	G	T	T	L	T	G	C	-	-	N	E	K	S	F	K	D	I	L	P	K	L	T	E	N	P	W	Q	G	N	A	S	S	-	-	D	K	G	A	T	L	T	I	K	K	E	A	F	P	A	E	S	K	S	V	I	I	G	C	T	G	G	S	P	E	K	H	H	C	T	V	K	L	E	F	A	G	-

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P	-	L	V	A	N	Q	V	V	T	C	P	D	-	K	K	S	T	A	-	A	V	I	L	T	P	T	-	E	N	H	F	T	L	K	C	P	K	T	A	L	T	E	P	P	T	L	A	Y	S	P	N	R	Q	I	C	P	A	G	T	T	S	S	C	T	S	K	A	V	T	L	S	S	L	I	P	E	A	E	D	S	W	W	T	G	D	S	A	S	L	D	T	A	G	I	K	L	T	V	P	I	E	K	F	P	V	T	T	Q	T	F	V	V	G	C	I	K	G	D	D	A	Q	-	S	C	M	V	T	V	T	V	Q	A	R
A	S	S	V	V	N	N	V	A	R	C	S	Y	G	A	D	S	T	L	G	P	V	K	L	S	A	E	G	P	T	T	M	T	L	V	C	G	K	D	G	V	K	V	P	Q	D	N	-	-	-	-	-	N	Q	Y	C	S	G	T	T	L	T	G	C	-	-	N	E	K	S	F	K	D	I	L	P	K	L	T	E	N	P	W	Q	G	N	A	S	S	-	-	D	K	G	A	T	L	T	I	K	K	E	A	F	P	A	E	S	K	S	V	I	I	G	C	T	G	G	S	P	E	K	H	H	C	T	V	K	L	E	F	A	G	-