Superfamily : 69118 [ AhpD-like ]
Class : All alpha proteins
Fold : AhpD-like
# of Members : 9
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1knca-  (   2 )                      siekLkaaLp---eyakdikl----nLssIt-
d1vkea-  (   6 )                    farlngtlntkff-nldsavyrpgkldvktkElm
d2af7a1  (   2 )                    eryrrGe--ilnr-nksytairdlapdlarfvae
d2cwqa1  (   2 )                drthervlqaaenlgeGlpraipllAekapglLlehgr
d2gmya1  (   2 )                               ktrinyaka----speafkavma
d2ouwa1  (   2 )     atvrlLddaeistlVavFddIratrgsfVnniWrglAn-dpal-LrtWq
d2oyoa1  (  12 )    iSslpvpdatqVpegVrklwakaeanigfvPnvfrAqAv-ngeqFlawwn
d2q0ta1  (   2 )            tqttpqPdpsrLrdeLvlHgkaspeWdSlVrldprfVdayLk
d3c1la-  (   5 )    isald-----glsepTkayfakcee-lglVpnvlkayAf-ddkklraftd
                                       aa           aaaa       aaaaaaa

                             60        70        80        90        100 
d1knca-  (  26 )    -----r--ssvLdqeqLWGTLLASAaAt--rnpqVladIgaeAtdhLsaa
d1vkea-  (  50 )    gLvasTvl----rçddçIryhLvrCVqegAsdeeIfeaLdiAlvvg--gs
d2af7a1  (  40 )    fayGdvysr-gvllktrelltLaaltvlra--ddqLkshVrgAlna--g-
d2cwqa1  (  41 )    swtyapekg-aldektrtlillgiAlatgs--eacvka-ahrAkrl--gl
d2gmya1  (  21 )    lenyVqs--SgLehrFIhLIkLrASiin--gCafCvdmHvkeSrhd-g--
d2ouwa1  (  55 )    vkt--vvgg-aldpltre-iylavstansç--syçahshtaaarak--g-
d2oyoa1  (  61 )    yfnllLnkegyLtnaeRELVAVVVSgvn--rClYCavshgAaLReflg--
d2q0ta1  (  45 )    fagvPr--rnhLddktrAFIaLaADACatqlyapGvarhirAlsfgAtre
d3c1la-  (  53 )    iyndll-gesgLskldre-IAVAVSsin--hCyyCltahGaaVRqlsg--
                                 aaaaaaaaaaaaaa     aaaaaaaaaaaaa     

                             110       120       130       140       150 
d1knca-  (  67 )    ArhAAlgAaaiMgmNNvfyrgrgfle---------------------gry
d1vkea-  (  94 )    iViphlrAvgfLeeLremengetis                         
d2af7a1  (  85 )    -CskeIieviqavyagfpaainavlAAkevfte                 
d2cwqa1  (  87 )    skealletlkiarqaqanavlghaapllevl                   
d2gmya1  (  64 )    lseqWInlMsvWreSpvYt-------------------------------
d2ouwa1  ( 100 )    tpaqhaevlaiiglaaqtnalvtaqipvdaflv                 
d2oyoa1  ( 107 )    dpqkAdaVavnwrhAd-Lt-------------------------------
d2q0ta1  (  95 )    eliEVleLvsTIgihtsnvgvpvllevleeeglrkgapplderrqklkae
d3c1la-  (  99 )    dpalGelv--nFraad-ls-------------------------------
                      aaa                                             

                             160       170       180       190       200 
d1knca-  (  96 )    ddlrpglrmniia-----------------------nPgipkanFeLWSF
d1vkea-                                                               
d2af7a1                                                               
d2cwqa1                                                               
d2gmya1  (  83 )    ------------------------------------------eqErALLg
d2ouwa1                                                               
d2oyoa1  ( 126 )    ------------------------------------------reqaLAay
d2q0ta1  ( 145 )    FetnrgywhptwegLLeldpdlFeayvefSsvPwrtgvLspkiKEFyCAF
d3c1la-  ( 117 )    ------------------------------------------prqtalef
                                                                      

                             210       220       230       240       250 
d1knca-  ( 123 )    AVSaingCshCl--vahehtLrtvgvdreaIfeAlkAAaiVsgVAqaLat
d1vkea-                                                               
d2af7a1                                                               
d2cwqa1                                                               
d2gmya1  (  91 )    wVDavTkiaetgapddafetLra-hFsdeeivkItvAIgAIntwNriAvg
d2ouwa1                                                               
d2oyoa1  ( 134 )    AeklTrhpa--evtaadlepLravgLddhqi-eLvqVIg-FnltNrvSsa
d2q0ta1  ( 196 )    DASathlyvpgl--klhirnAlrygAta-eelELleiVs-vtgihgaElg
d3c1la-  ( 126 )    AvklTeepa--kiveadraaLrkagFsdrdiwdIasTAa-ffnsNrvaaa
                                                                      

                             260   
d1knca-  ( 171 )    ieals          
d1vkea-                            
d2af7a1                            
d2cwqa1                            
d2gmya1  ( 140 )    fr--sqhp----vea
d2ouwa1                            
d2oyoa1  ( 182 )    lg--FvPnpeyyqar
d2q0ta1  ( 243 )    Aplleaalkrsgaaa
d3c1la-  ( 174 )    id---rPndeyhaar
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Antioxidant defense protein AhpDAhpDMycobacterium tuberculosis [TaxId: 1773]view
Hypothetical protein TM1620CMD-likeThermotoga maritima [TaxId: 2336]view
Gamma-carboxymuconolactone decarboxylase, CMDCMD-likeMethanobacterium thermoautotrophicum [TaxId: 145262]view
Hypothetical protein TTHA0727TTHA0727-likeThermus thermophilus [TaxId: 274]view
Hypothetical protein Atu0492Atu0492-likeAgrobacterium tumefaciens [TaxId: 358]view
Hypothetical protein Rru_A0301TTHA0727-likeRhodospirillum rubrum [TaxId: 1085]view
Uncharacterized protein Dgeo_1446Atu0492-likeDeinococcus geothermalis [TaxId: 68909]view
Hypothetical protein Bxeno_B2006AhpDBurkholderia xenovorans [TaxId: 36873]view
automated matchesAtu0492-likeMesorhizobium loti [TaxId: 266835]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260
- - - - - - - - - - - - - - - - - - S I E K L K A A L P - - - E Y A K D I K L - - - - N L S S I T - - - - - - R - - S S V L D Q E Q L W G T L L A S A A A T - - R N P Q V L A D I G A E A T D H L S A A A R H A A L G A A A I M G M N N V F Y R G R G F L E - - - - - - - - - - - - - - - - - - - - - G R Y D D L R P G L R M N I I A - - - - - - - - - - - - - - - - - - - - - - - N P G I P K A N F E L W S F A V S A I N G C S H C L - - V A H E H T L R T V G V D R E A I F E A L K A A A I V S G V A Q A L A T I E A L S - - - - - - - - - -
- - - - - - - - - - - - - - - - F A R L N G T L N T K F F - N L D S A V Y R P G K L D V K T K E L M G L V A S T V L - - - - R C D D C I R Y H L V R C V Q E G A S D E E I F E A L D I A L V V G - - G S I V I P H L R A V G F L E E L R E M E N G E T I S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - E R Y R R G E - - I L N R - N K S Y T A I R D L A P D L A R F V A E F A Y G D V Y S R - G V L L K T R E L L T L A A L T V L R A - - D D Q L K S H V R G A L N A - - G - - C S K E I I E V I Q A V Y A G F P A A I N A V L A A K E V F T E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - D R T H E R V L Q A A E N L G E G L P R A I P L L A E K A P G L L L E H G R S W T Y A P E K G - A L D E K T R T L I L L G I A L A T G S - - E A C V K A - A H R A K R L - - G L S K E A L L E T L K I A R Q A Q A N A V L G H A A P L L E V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - K T R I N Y A K A - - - - S P E A F K A V M A L E N Y V Q S - - S G L E H R F I H L I K L R A S I I N - - G C A F C V D M H V K E S R H D - G - - L S E Q W I N L M S V W R E S P V Y T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E Q E R A L L G W V D A V T K I A E T G A P D D A F E T L R A - H F S D E E I V K I T V A I G A I N T W N R I A V G F R - - S Q H P - - - - V E A
- A T V R L L D D A E I S T L V A V F D D I R A T R G S F V N N I W R G L A N - D P A L - L R T W Q V K T - - V V G G - A L D P L T R E - I Y L A V S T A N S C - - S Y C A H S H T A A A R A K - - G - T P A Q H A E V L A I I G L A A Q T N A L V T A Q I P V D A F L V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
I S S L P V P D A T Q V P E G V R K L W A K A E A N I G F V P N V F R A Q A V - N G E Q F L A W W N Y F N L L L N K E G Y L T N A E R E L V A V V V S G V N - - R C L Y C A V S H G A A L R E F L G - - D P Q K A D A V A V N W R H A D - L T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R E Q A L A A Y A E K L T R H P A - - E V T A A D L E P L R A V G L D D H Q I - E L V Q V I G - F N L T N R V S S A L G - - F V P N P E Y Y Q A R
- - - - - - - - T Q T T P Q P D P S R L R D E L V L H G K A S P E W D S L V R L D P R F V D A Y L K F A G V P R - - R N H L D D K T R A F I A L A A D A C A T Q L Y A P G V A R H I R A L S F G A T R E E L I E V L E L V S T I G I H T S N V G V P V L L E V L E E E G L R K G A P P L D E R R Q K L K A E F E T N R G Y W H P T W E G L L E L D P D L F E A Y V E F S S V P W R T G V L S P K I K E F Y C A F D A S A T H L Y V P G L - - K L H I R N A L R Y G A T A - E E L E L L E I V S - V T G I H G A E L G A P L L E A A L K R S G A A A
I S A L D - - - - - G L S E P T K A Y F A K C E E - L G L V P N V L K A Y A F - D D K K L R A F T D I Y N D L L - G E S G L S K L D R E - I A V A V S S I N - - H C Y Y C L T A H G A A V R Q L S G - - D P A L G E L V - - N F R A A D - L S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P R Q T A L E F A V K L T E E P A - - K I V E A D R A A L R K A G F S D R D I W D I A S T A A - F F N S N R V A A A I D - - - R P N D E Y H A A R

 

 

 

 

 

Member Chain UniProtKB GO term
d1knca_ A P9WQB5 GO:0004601
d1knca_ A P9WQB5 GO:0005515
d1knca_ A P9WQB5 GO:0005829
d1knca_ A P9WQB5 GO:0005886
d1knca_ A P9WQB5 GO:0006979
d1knca_ A P9WQB5 GO:0008785
d1knca_ A P9WQB5 GO:0015036
d1knca_ A P9WQB5 GO:0016209
d1knca_ A P9WQB5 GO:0032843
d1knca_ A P9WQB5 GO:0045454
d1knca_ A P9WQB5 GO:0051920
d1knca_ A P9WQB5 GO:0098869
d1vkea_ A Q9X1V5 GO:0016491
d1vkea_ A Q9X1V5 GO:0051920
d1vkea_ A Q9X1V5 GO:0098869
d2af7a1 A O26336 GO:0051920
d2af7a1 A O26336 GO:0098869
d2cwqa1 A Q5SMF5 GO:0016491
d2cwqa1 A Q5SMF5 GO:0051920
d2cwqa1 A Q5SMF5 GO:0098869
d2gmya1 A Q7D1C9 GO:0051920
d2gmya1 A Q7D1C9 GO:0098869
d2ouwa1 A Q2RXN9 GO:0051920
d2ouwa1 A Q2RXN9 GO:0098869
d2oyoa1 A Q1IYE3 GO:0004601
d2oyoa1 A Q1IYE3 GO:0051920
d2oyoa1 A Q1IYE3 GO:0098869
d2q0ta1 A Q13LR5 GO:0016491
d2q0ta1 A Q13LR5 GO:0051920
d2q0ta1 A Q13LR5 GO:0098869
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in