PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1ou0a-  (  17 )                  slaaId-sId-pdisg-prhiVvkAIhaagdfaIap
d4au1a-  (   2 )    pheyekdgakiyvqsFatiraeAdlarFtpeeevVVVrMIhaagmvgLEn
                                   aaaaa             aaaaaaaaaa    333

                             60        70        80        90        100 
d1ou0a-  (  52 )    lIrysdgffksl-aklkegCtIICDse-VragIysrpVlerNrVvCylnd
d4au1a-  (  52 )    hVrFapgMAiaAraaLeagapILCDarmVSegItrarLpakNeViCtlqd
                    3bbb         aaaa    bbb                   bb     

                             110       120       130       140       150 
d1ou0a-  ( 102 )    vrSke-AdvngitrsaaGIriAqdhr-nSviVIGnaptALleAr--Ieen
d4au1a-  ( 102 )    prVpalaqemgntrsAAALelWrpkLegAVVAIGnaptALfhLlnMLedp
                      aa         aaaaa           bbbb   aaaaaa        

                             160       170       180       190       200 
d1ou0a-  ( 152 )    -gwydIPIVGIPvgfinAskAKegLvssh-IeYISVeghrGgspIAAsIV
d4au1a-  ( 152 )    aCprPaAIIGCPvgfigAaeSKaaLAvanpvpWVIVegrlGgsaITvaAV
                           bbb       aaaaaaaaaa     bbbb      aaaaaaaa

                            
d1ou0a-  ( 200 )    NGFG-rfL
d4au1a-  ( 202 )    NALAcrke
                    aaa

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1ou0a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1ou0a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Precorrin-8x methylmutase related protein	Precorrin-8X methylmutase CbiC/CobH	Thermoplasma acidophilum [TaxId: 2303]		view
d4au1a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d4au1a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	Precorrin-8X methylmutase CbiC/CobH	Rhodobacter capsulatus [TaxId: 272942]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1ou0a_	A	Q9HKE7	GO:0009236
d1ou0a_	A	Q9HKE7	GO:0016853
d1ou0a_	A	Q9HKE7	GO:0016993

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