PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1uz5a2  (   5 )       kvvplekalevvqsfkisp-gieevpiekGlgriAAediySpidvPp
d2nqra2  (   7 )        lmsldtalnemlsrvtpltaqetlplvqCfgriLAsdVvSpldvpg
d6fgca1  ( 319 )    spfpltsmdkafitvlemtpvl-gteiinyrdGmgrvlaqdvyAkdnlPp
                           aaaaaaaaaa       bbbbb333         bb       

                             60        70        80        90        100 
d1uz5a2  (  51 )    fdrAtvdGYAVrAedTfmAseaspvrLkvigsVhageePkfkLgkgeAAy
d2nqra2  (  53 )    fdnSamdGYAVrladiasg-----qpLpvagkSfagqpyhgeWpagtCIr
d6fgca1  ( 368 )    fpASvkdGYAvrAadgp-------gdrfiigeSqageqptqtvmpgqvMr
                      bb   bbbb                 bbbbb              bbb

                             110       120       130       140       150 
d1uz5a2  ( 101 )    IstgAmLPgnAdAViqfedVervn--------geIlIykpAypglgVmkk
d2nqra2  (  98 )    ImtgApvPegCeAVVmqeqTeqmd--------ngVrFtaeVrsgqnIrrr
d6fgca1  ( 411 )    vttgAPiPcgAdAvvqvedteliresddgteelevrilvqArpgqdirpi
                    b           bbbb333 bb            bbb         bb  

                             160       170       180      
d1uz5a2  ( 143 )    GidiekgrlLVkkgerLgfkqtalLsaVginkVkVfrk
d2nqra2  ( 140 )    genisagavvfpagtrLttaelpvIasLgiaeVpVirk
d6fgca1  ( 461 )    GhdikrgecvlakgthMgpseigllatvgvtevevnkf
                            bbb          aaaaaa    bbbbb

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d1uz5a2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1uz5a2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains	MoeA N-terminal region -like	Pyrococcus horikoshii, PH0582 [TaxId: 53953]	view
d2nqra2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2nqra2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains	MoeA N-terminal region -like	Escherichia coli [TaxId: 562]	view
d6fgca1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d6fgca1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	MoeA N-terminal region -like	Norway rat (Rattus norvegicus) [TaxId: 10116]	view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Show entries

Search:

Member	Chain	UniProtKB	GO term
d1uz5a2	A	O58335	GO:0005737
d1uz5a2	A	O58335	GO:0006777
d1uz5a2	A	O58335	GO:0018315
d1uz5a2	A	O58335	GO:0032324
d1uz5a2	A	O58335	GO:0061599
d1uz5a2	A	O58335	GO:0005737
d1uz5a2	A	O58335	GO:0006777
d1uz5a2	A	O58335	GO:0018315
d1uz5a2	A	O58335	GO:0032324
d1uz5a2	A	O58335	GO:0061599

Showing 1 to 10 of 35 entries

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