PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1gwya-  (   1 )    alAgtiiaGasLtfqvLdkVleelgkvsrKIAVGIdNes-ggtWtalnay
d2ofca-  (   1 )                               tykItVrvyqtnpnafFhpvekt
                                                 bbbbbbbb      bbbbbbb

                             60        70        80        90        100 
d1gwya-  (  50 )    frs---GttdviLPefVpntkALLYSGrKdtgpvatGAvAAFAYyMssgn
d2ofca-  (  24 )    vwkyanggtWtitd--------dqhvLtMg----gsgTSGTLrFhAdnge
                    b                      bbbbb          bbbbbbbb    

                             110       120       130       140       150 
d1gwya-  (  97 )    TLGVMFSVpfdynwysNwWDVkIysgkrrAdqgMYedLyyg----np--y
d2ofca-  (  62 )    sFTATFGVhn----ykrWCdIvTnLaadetGmvINqqYYsqknreearer
                    bbbbbbbb         bbbbbb        aaaaaa             

                             160       170       180     
d1gwya-  ( 141 )    rGdngwheknLgyglrMkGIMts--ageAkMqIkIsr
d2ofca-  ( 108 )    qls--nyevkNakgrnFeIvYteaegndLhAnLiIg 
                         bbbbb     bbbbbb      bbbbbbbb

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1gwya- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1gwya- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Sticholysin II	Anemone pore-forming cytolysin	Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]		view
d2ofca- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2ofca- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	Fungal fruit body lectin	Athelia rolfsii [TaxId: 39291]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1gwya_	A	P07845	GO:0005576
d1gwya_	A	P07845	GO:0006811
d1gwya_	A	P07845	GO:0006812
d1gwya_	A	P07845	GO:0015267
d1gwya_	A	P07845	GO:0016020
d1gwya_	A	P07845	GO:0031640
d1gwya_	A	P07845	GO:0035821
d1gwya_	A	P07845	GO:0042151
d1gwya_	A	P07845	GO:0042802
d1gwya_	A	P07845	GO:0044218
d1gwya_	A	P07845	GO:0046930
d1gwya_	A	P07845	GO:0046931
d1gwya_	A	P07845	GO:0051715
d1gwya_	A	P07845	GO:0055085
d1gwya_	A	P07845	GO:0090729

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