BASE   PART 1   PART 2  
Superfamily : 63380 [ Riboflavin synthase domain-like ]
Class : All beta proteins
Fold : Reductase/isomerase/elongation factor common domain
# of Members : 7
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1ddga1  ( 226 )                                ihtspysk-daplvAsLsvnqk
d1f20a1  ( 963 )             sWkrnkFrLtyvaeapdltqGLSnVhk-krVSaArLlsrqn
d2rc5a1  (   7 )                           Ptr--epqinlfk-snpykAkVisNvl
d3lo8a1  (   8 )                  skvsvaplhlesakepplntykpkePftAtivsves
d3qfta1  ( 246 )    rqYelvvhtdidaakvymGEmgrlksyenqkppFda-knPflAaVttNrk
d4dqla1  ( 661 )                                          gafstnVvaSke
d5gxub1  ( 304 )                                  ytvfda-qhpykAnVAvkre
                                                            bbbbbbbbbb

                             60        70        80        90        100 
d1ddga1  ( 247 )    itg-------rnsekdvrhIeIdLgdsg-LrYqpgDaLGVwYqNdpalVk
d1f20a1  (1003 )    lqs-------pkssrstIfVrLhtngnqeLqYqpgdhLGVFPGNhedlVn
d2rc5a1  (  32 )    ltpetgtgkrpeGealvhrIvLaIdHs-aYPYvigQsGGViPpgedpekk
d3lo8a1  (  44 )    lvgp----kap---getÇhividHgg--nvpYwegqsYGviPpgenpkkp
d3qfta1  ( 295 )    lnq-------gte-rhlMhLeLdIsdSk-irYesgdhVAVyPaNdsalVn
d4dqla1  ( 673 )    lqq-------pgsarstrhLeIeLp---easYqegDhLGViPrNyegIvn
d5gxub1  ( 323 )    lht-------pes-dscIhLeFdIagsg-ltYetgDhVGVlCdNls-tVd
                                    bbbbbbb             bbbb      aaaa

                             110       120       130       140       150 
d1ddga1  ( 289 )    eLVelL--wlkgdepVtve--------------------gktlpLneALq
d1f20a1  (1046 )    aLierLedappanhvVkvemleerntalgvisnwkdesrLppctIfqAFk
d2rc5a1  (  83 )    ak------------------------------------------------
d3lo8a1  (  85 )    --------------------------------------------------
d3qfta1  ( 336 )    qLGkiL--gadLdvvMsLnNlde--------esnkkhpFpCpTsYrtALt
d4dqla1  ( 714 )    rVtarF--gldasqqirla----------------------tvsVeelLq
d5gxub1  ( 365 )    eAlrlL--dmspdtflh-------------------ppfp-pcnLrtALt
                    aaa                                         aaaa  

                             160       170       180       190       200 
d1ddga1  ( 317 )    whfeLtv-NtanIVenYAtltrsetLlplvgdk--------akLqhyAa-
d1f20a1  (1096 )    yYLdIttpPtplqLqqFAsLAtnekekqrLlvLSk----glqeyeeWkwg
d2rc5a1  (  85 )    --------------------------------------------------
d3lo8a1  (  85 )    --------------------------------------------------
d3qfta1  ( 376 )    yYLdItnpPrtnVLyeLAqyAsepseqelLrkMAsssgeGkelylswVve
d4dqla1  ( 753 )    -yvELqdpVtrtQLraMAakTv-pphkveLealle-----kqaykeqVla
d5gxub1  ( 410 )    -yAcLlssPkksALvaLAahAsdpteaerLkhLAsp----agdyskwVve
                              aaaaaaa                                 

                             210       220       230       240       250 
d1ddga1  ( 357 )    -tTpIVDMVrfsp-aqldaeaLin-lLrpLtPrlysIassqa---evene
d1f20a1  (1142 )    knPtMveVLeeFpsIqMpAtLLLT-qLslLqpryysIssspd---mypde
d2rc5a1  (  85 )    -----------------------gladvgytvrlysIaSpsySfgmkedn
d3lo8a1  (  85 )    -------------------------g-apqnvrlysiaStrYGdnfdGrt
d3qfta1  ( 426 )    arrhILAILqdCpsLrPpidHLCe-lLprLqahyysIasssk---vhpns
d4dqla1  ( 797 )    krlTMLeLLekYpaCeMkfseFIa-lLpsirpryysIsssPr---vdekq
d5gxub1  ( 457 )    sqrSLleVMaefpsAkPplgvFFagVAprlqprfysIssspk---iaetr
                        aaaaaaa       aaaaaa        bbbb             b

                             260       270       280       290       300 
d1ddga1  ( 401 )    VhVtVgVvrydve-g--rara----gGASSfLAdrveee---geVrVFIe
d1f20a1  (1188 )    VHLtVaivsyhTrdgeGpvhh----gvCsswLnriqa----ddvVPCfvr
d2rc5a1  ( 112 )    IEFiIkrdNiyn-----gniq--fkgvCsnyMCdLkp----gdeVtMtGP
d3lo8a1  ( 109 )    GSlcvrravyydp--etgkedpskngvCsnflÇnSkp----gdkiqltgP
d3qfta1  ( 472 )    VHIcavVveyeTkag--rink----gvAtnwLrakepvg-gralVpMfvr
d4dqla1  ( 843 )    ASItVsvvsgeAwSgyg-eyk----gIAsnyLaelqe----gdtItCfis
d5gxub1  ( 504 )    IhVtCalv-ykmptg--rihk----gvCStwMknAvpysencssApIfVr
                    bbbbbb                    aaaaaaa          bbbbbbb

                          
d1ddga1  ( 441 )    hndnfr
d1f20a1  (1230 )    gap   
d2rc5a1  ( 153 )    sgkkfl
d3lo8a1  ( 153 )    sgki  
d3qfta1  ( 518 )    ksqf  
d4dqla1  ( 884 )    tps   
d5gxub1  ( 550 )    qsnf
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Sulfite reductase flavoproteinNADPH-cytochrome p450 reductase FAD-binding domain-likeEscherichia coli [TaxId: 562]view
Neuronal nitric-oxide synthase FAD/NADP+ domainNADPH-cytochrome p450 reductase FAD-binding domain-likeNorway rat (Rattus norvegicus) [TaxId: 10116]view
automated matchesautomated matchesLeptospira interrogans [TaxId: 173]view
automated matchesautomated matchesMaize (Zea mays) [TaxId: 4577]view
automated matchesNADPH-cytochrome p450 reductase FAD-binding domain-likeHuman (Homo sapiens) [TaxId: 9606]view
automated matchesautomated matchesBacillus megaterium [TaxId: 1404]view
automated matchesautomated matchesThale cress (Arabidopsis thaliana) [TaxId: 3702]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300
- - - - - - - - - - - - - - - - - - - - - - - - - - - - I H T S P Y S K - D A P L V A S L S V N Q K I T G - - - - - - - R N S E K D V R H I E I D L G D S G - L R Y Q P G D A L G V W Y Q N D P A L V K E L V E L L - - W L K G D E P V T V E - - - - - - - - - - - - - - - - - - - - G K T L P L N E A L Q W H F E L T V - N T A N I V E N Y A T L T R S E T L L P L V G D K - - - - - - - - A K L Q H Y A A - - T T P I V D M V R F S P - A Q L D A E A L I N - L L R P L T P R L Y S I A S S Q A - - - E V E N E V H V T V G V V R Y D V E - G - - R A R A - - - - G G A S S F L A D R V E E E - - - G E V R V F I E H N D N F R
- - - - - - - - - S W K R N K F R L T Y V A E A P D L T Q G L S N V H K - K R V S A A R L L S R Q N L Q S - - - - - - - P K S S R S T I F V R L H T N G N Q E L Q Y Q P G D H L G V F P G N H E D L V N A L I E R L E D A P P A N H V V K V E M L E E R N T A L G V I S N W K D E S R L P P C T I F Q A F K Y Y L D I T T P P T P L Q L Q Q F A S L A T N E K E K Q R L L V L S K - - - - G L Q E Y E E W K W G K N P T M V E V L E E F P S I Q M P A T L L L T - Q L S L L Q P R Y Y S I S S S P D - - - M Y P D E V H L T V A I V S Y H T R D G E G P V H H - - - - G V C S S W L N R I Q A - - - - D D V V P C F V R G A P - - -
- - - - - - - - - - - - - - - - - - - - - - - P T R - - E P Q I N L F K - S N P Y K A K V I S N V L L T P E T G T G K R P E G E A L V H R I V L A I D H S - A Y P Y V I G Q S G G V I P P G E D P E K K A K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G L A D V G Y T V R L Y S I A S P S Y S F G M K E D N I E F I I K R D N I Y N - - - - - G N I Q - - F K G V C S N Y M C D L K P - - - - G D E V T M T G P S G K K F L
- - - - - - - - - - - - - - S K V S V A P L H L E S A K E P P L N T Y K P K E P F T A T I V S V E S L V G P - - - - K A P - - - G E T C H I V I D H G G - - N V P Y W E G Q S Y G V I P P G E N P K K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G - A P Q N V R L Y S I A S T R Y G D N F D G R T G S L C V R R A V Y Y D P - - E T G K E D P S K N G V C S N F L C N S K P - - - - G D K I Q L T G P S G K I - -
R Q Y E L V V H T D I D A A K V Y M G E M G R L K S Y E N Q K P P F D A - K N P F L A A V T T N R K L N Q - - - - - - - G T E - R H L M H L E L D I S D S K - I R Y E S G D H V A V Y P A N D S A L V N Q L G K I L - - G A D L D V V M S L N N L D E - - - - - - - - E S N K K H P F P C P T S Y R T A L T Y Y L D I T N P P R T N V L Y E L A Q Y A S E P S E Q E L L R K M A S S S G E G K E L Y L S W V V E A R R H I L A I L Q D C P S L R P P I D H L C E - L L P R L Q A H Y Y S I A S S S K - - - V H P N S V H I C A V V V E Y E T K A G - - R I N K - - - - G V A T N W L R A K E P V G - G R A L V P M F V R K S Q F - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A F S T N V V A S K E L Q Q - - - - - - - P G S A R S T R H L E I E L P - - - E A S Y Q E G D H L G V I P R N Y E G I V N R V T A R F - - G L D A S Q Q I R L A - - - - - - - - - - - - - - - - - - - - - - T V S V E E L L Q - Y V E L Q D P V T R T Q L R A M A A K T V - P P H K V E L E A L L E - - - - - K Q A Y K E Q V L A K R L T M L E L L E K Y P A C E M K F S E F I A - L L P S I R P R Y Y S I S S S P R - - - V D E K Q A S I T V S V V S G E A W S G Y G - E Y K - - - - G I A S N Y L A E L Q E - - - - G D T I T C F I S T P S - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y T V F D A - Q H P Y K A N V A V K R E L H T - - - - - - - P E S - D S C I H L E F D I A G S G - L T Y E T G D H V G V L C D N L S - T V D E A L R L L - - D M S P D T F L H - - - - - - - - - - - - - - - - - - - P P F P - P C N L R T A L T - Y A C L L S S P K K S A L V A L A A H A S D P T E A E R L K H L A S P - - - - A G D Y S K W V V E S Q R S L L E V M A E F P S A K P P L G V F F A G V A P R L Q P R F Y S I S S S P K - - - I A E T R I H V T C A L V - Y K M P T G - - R I H K - - - - G V C S T W M K N A V P Y S E N C S S A P I F V R Q S N F - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1ddga1 A P38038 GO:0016491
d1ddga1 A P38038 GO:0016491
d1ddga1 A P38038 GO:0016491
d1f20a1 A P29476 GO:0016491
d1f20a1 A P29476 GO:0016491
d1f20a1 A P29476 GO:0016491
d1f20a1 A P29476 GO:0016491
d1f20a1 A P29476 GO:0016491
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in