PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1ataa-  (   1 )    eaekçtkpneqwtkçGg-çeGtça-qkivpçtreçkpprçeÇiasagfvr
d1ccva-  (   1 )      eeÇ-gpnevfntçgsaçaptça-qpktriçtmqçrigçqÇq--egflr
d1eaic-  (   1 )    gqesÇ-gpnevwteçtg-çemkçgpdentpçplmçrrpsçeÇspgrgmrr
d1hx2a-  (   1 )      nfvçppgqtfqtçAssçpKtçetrnklvlÇdkkçnqrçGÇi--sgtvl
                              bbb                         bbb       bb

                             60     
d1ataa-  (  49 )    daq--gnçikfedçpk
d1ccva-  (  45 )    nge--gaÇvlpenç  
d1eaic-  (  49 )    tnd--gkÇipasqçp 
d1hx2a-  (  47 )    kskdsseÇvhpskç  
                           bb

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d1ataa- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1ataa- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Ascaris trypsin inhibitor, ATI	ATI-like	Pig roundworm (Ascaris suum) [TaxId: 6253]	view
d1ccva- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1ccva- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Chymotrypsin inhibitor AMCI	ATI-like	Honeybee (Apis mellifera) [TaxId: 7460]	view
d1eaic- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1eaic- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Ascaris elastase inhibitor	ATI-like	Pig roundworm (Ascaris suum) [TaxId: 6253]	view
d1hx2a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1hx2a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	BSTI	BSTI	Fire-bellied toad (Bombina bombina) [TaxId: 8345]	view

Domain ID	Name
d2h9ec-	2h9e C:

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

									10										20										30										40										50										60
E	A	E	K	C	T	K	P	N	E	Q	W	T	K	C	G	G	-	C	E	G	T	C	A	-	Q	K	I	V	P	C	T	R	E	C	K	P	P	R	C	E	C	I	A	S	A	G	F	V	R	D	A	Q	-	-	G	N	C	I	K	F	E	D	C	P	K
-	-	E	E	C	-	G	P	N	E	V	F	N	T	C	G	S	A	C	A	P	T	C	A	-	Q	P	K	T	R	I	C	T	M	Q	C	R	I	G	C	Q	C	Q	-	-	E	G	F	L	R	N	G	E	-	-	G	A	C	V	L	P	E	N	C	-	-
G	Q	E	S	C	-	G	P	N	E	V	W	T	E	C	T	G	-	C	E	M	K	C	G	P	D	E	N	T	P	C	P	L	M	C	R	R	P	S	C	E	C	S	P	G	R	G	M	R	R	T	N	D	-	-	G	K	C	I	P	A	S	Q	C	P	-
-	-	N	F	V	C	P	P	G	Q	T	F	Q	T	C	A	S	S	C	P	K	T	C	E	T	R	N	K	L	V	L	C	D	K	K	C	N	Q	R	C	G	C	I	-	-	S	G	T	V	L	K	S	K	D	S	S	E	C	V	H	P	S	K	C	-	-

Member	Chain	UniProtKB	GO term
d1ataa_	A	P19398	GO:0004867
d1ataa_	A	P19398	GO:0005576
d1ataa_	A	P19398	GO:0010466
d1ccva_	A	P56682	GO:0004867
d1ccva_	A	P56682	GO:0005576
d1ccva_	A	P56682	GO:0010466
d1eaic_	C	P00772	GO:0005576
d1eaic_	C	P00772	GO:0004867
d1eaic_	C	P00772	GO:0010466
d1eaic_	C	P07851	GO:0005576
d1eaic_	C	P07851	GO:0004867
d1eaic_	C	P07851	GO:0010466

									10										20										30										40										50										60
E	A	E	K	C	T	K	P	N	E	Q	W	T	K	C	G	G	-	C	E	G	T	C	A	-	Q	K	I	V	P	C	T	R	E	C	K	P	P	R	C	E	C	I	A	S	A	G	F	V	R	D	A	Q	-	-	G	N	C	I	K	F	E	D	C	P	K
-	-	E	E	C	-	G	P	N	E	V	F	N	T	C	G	S	A	C	A	P	T	C	A	-	Q	P	K	T	R	I	C	T	M	Q	C	R	I	G	C	Q	C	Q	-	-	E	G	F	L	R	N	G	E	-	-	G	A	C	V	L	P	E	N	C	-	-
G	Q	E	S	C	-	G	P	N	E	V	W	T	E	C	T	G	-	C	E	M	K	C	G	P	D	E	N	T	P	C	P	L	M	C	R	R	P	S	C	E	C	S	P	G	R	G	M	R	R	T	N	D	-	-	G	K	C	I	P	A	S	Q	C	P	-
-	-	N	F	V	C	P	P	G	Q	T	F	Q	T	C	A	S	S	C	P	K	T	C	E	T	R	N	K	L	V	L	C	D	K	K	C	N	Q	R	C	G	C	I	-	-	S	G	T	V	L	K	S	K	D	S	S	E	C	V	H	P	S	K	C	-	-

									10										20										30										40										50										60
E	A	E	K	C	T	K	P	N	E	Q	W	T	K	C	G	G	-	C	E	G	T	C	A	-	Q	K	I	V	P	C	T	R	E	C	K	P	P	R	C	E	C	I	A	S	A	G	F	V	R	D	A	Q	-	-	G	N	C	I	K	F	E	D	C	P	K
-	-	E	E	C	-	G	P	N	E	V	F	N	T	C	G	S	A	C	A	P	T	C	A	-	Q	P	K	T	R	I	C	T	M	Q	C	R	I	G	C	Q	C	Q	-	-	E	G	F	L	R	N	G	E	-	-	G	A	C	V	L	P	E	N	C	-	-
G	Q	E	S	C	-	G	P	N	E	V	W	T	E	C	T	G	-	C	E	M	K	C	G	P	D	E	N	T	P	C	P	L	M	C	R	R	P	S	C	E	C	S	P	G	R	G	M	R	R	T	N	D	-	-	G	K	C	I	P	A	S	Q	C	P	-
-	-	N	F	V	C	P	P	G	Q	T	F	Q	T	C	A	S	S	C	P	K	T	C	E	T	R	N	K	L	V	L	C	D	K	K	C	N	Q	R	C	G	C	I	-	-	S	G	T	V	L	K	S	K	D	S	S	E	C	V	H	P	S	K	C	-	-

									10										20										30										40										50										60
E	A	E	K	C	T	K	P	N	E	Q	W	T	K	C	G	G	-	C	E	G	T	C	A	-	Q	K	I	V	P	C	T	R	E	C	K	P	P	R	C	E	C	I	A	S	A	G	F	V	R	D	A	Q	-	-	G	N	C	I	K	F	E	D	C	P	K
-	-	E	E	C	-	G	P	N	E	V	F	N	T	C	G	S	A	C	A	P	T	C	A	-	Q	P	K	T	R	I	C	T	M	Q	C	R	I	G	C	Q	C	Q	-	-	E	G	F	L	R	N	G	E	-	-	G	A	C	V	L	P	E	N	C	-	-
G	Q	E	S	C	-	G	P	N	E	V	W	T	E	C	T	G	-	C	E	M	K	C	G	P	D	E	N	T	P	C	P	L	M	C	R	R	P	S	C	E	C	S	P	G	R	G	M	R	R	T	N	D	-	-	G	K	C	I	P	A	S	Q	C	P	-
-	-	N	F	V	C	P	P	G	Q	T	F	Q	T	C	A	S	S	C	P	K	T	C	E	T	R	N	K	L	V	L	C	D	K	K	C	N	Q	R	C	G	C	I	-	-	S	G	T	V	L	K	S	K	D	S	S	E	C	V	H	P	S	K	C	-	-