Superfamily : 56983 [ Viral glycoprotein, central and dimerisation domains ]
Class : Membrane and cell surface proteins and peptides
Fold : Viral glycoprotein, central and dimerisation domains
# of Members : 3
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1svba2  (   1 )    sthlenrdfvtGtqgtt--rvtLvLelgVTItAe------gkpsMD
d3n40f1  (  -1 )                    gGyehvtvIpNtvgvpyktlVnrpgyspmvLeMe
d3p54a1  (   1 )    FNÇlgmgnrdfieGasgat--wvdLvLegdSÇLTImAn------dkPtLD
                                         bbbbb      bbbb            bb

                             60        70        80        90        100 
d1svba2  (  43 )    VWLdaIyQenPaktrEYÇLhAklsdtkvaArçptmgpAtlaeehqggT
d3n40f1  (  33 )    LlsVtleP-tlsldYITÇ-eykTvipspyVkçç--gtAeçk--dknlpdy
d3p54a1  (  43 )    VrMinIeAsqLaevrSYÇYhAsVtdisTvArçpttgeAhNekradssYVÇ
                    bbbbbbbb   bbbbbb   bbbb    bb                    

                             110       120       130       140       150 
d1svba2  (  93 )    krdqSdRgwgn----------hÇglfgkGsIVAÇVkAaÇea---kkkAtG
d3n40f1  (  77 )    sçkvft-----gvyPfmwggayÇfçdaeNTQlSeAhVeksesÇktefAsA
d3p54a1  (  93 )    kqgfTdRgwgn----------gÇgffgkGsIDTÇAkFsÇt-----skAiG
                    bbbbbb                       bbbbbbbbbb        bbb

                             160       170       180       190       200 
d1svba2  ( 130 )    HvYdankIvYtVkVEPhtgdy--vaaneths----grktAsFtissekti
d3n40f1  ( 122 )    yrAh--tasasAkLrVlYq---------------gnnItVtAyAn-Gdha
d3p54a1  ( 128 )    rtIqpenIkYkVGIFVhgtttsenhgnysaQvgasQAakftVtPnapsvt
                    bb      bbbbbbbb                     bbbbb       b

                             210       220       230       240       250 
d1svba2  ( 174 )    ltMgeygdVsLlÇrVasGvdlaqtVILeldktvehlptAWqVhrdwFnd-
d3n40f1  ( 154 )    vtvkd-AkFiVGpmssawtPFdnkIVvyk-------gdVynmdYppfgaG
d3p54a1  ( 178 )    lkLgdYgeVtLdÇePrsGlnteafYVMtVgs------kSFLVhrewFhd-
                    bb     bbbb            bbbbb          bbb         

                             260       270       280       290       300 
d1svba2  ( 223 )    ----lalPwkh-egaqnWnnaerLVeFgaphav--kMdVynlgdqtgvLl
d3n40f1  ( 196 )    rpgqFGDIQSrtpeskdVyAnT-qLvLqrPaagtvhVpysQapsGFkywl
d3p54a1  ( 221 )    ----lalPwts-psstawrnrelLMefegahat--kqsVvalgsqegglh
                            b                bb           bb     aaaaa

                             310       320       330       340       350 
d1svba2  ( 266 )    kaLa--------gvpvAhIegtkyhLksghVt-ÇeVGLe----kLkmkgl
d3n40f1  ( 245 )    kergaSlqhtApfgÇqIatn--pVrAvnÇavgnMpIsIdIpeaAFtrvvd
d3p54a1  ( 264 )    qaLa--------gaivVeys-ssVmLtsGhLk-ÇrLkMd----kLalkgt
                    aa             bbb      b        bbbb             

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Envelope glycoproteinViral glycoprotein, central and dimerisation domainsTick-borne encephalitis virus [TaxId: 11084]view
automated matchesViral glycoprotein, central and dimerisation domainsChikungunya virus [TaxId: 37124]view
automated matchesautomated matchesJapanese encephalitis virus [TaxId: 11072]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
S R C T H L E N R D F V T G T Q G T T - - R V T L V L E L G G C V T I T A E - - - - - - G K P S M D V W L D A I Y Q E N P A K T R E Y C L H A K L S D T K V A A R C P T M G P A T L A E E H Q G G T V C K R D Q S D R G W G N - - - - - - - - - - H C G L F G K G S I V A C V K A A C E A - - - K K K A T G H V Y D A N K I V Y T V K V E P H T G D Y - - V A A N E T H S - - - - G R K T A S F T I S S E K T I L T M G E Y G D V S L L C R V A S G V D L A Q T V I L E L D K T V E H L P T A W Q V H R D W F N D - - - - - L A L P W K H - E G A Q N W N N A E R L V E F G A P H A V - - K M D V Y N L G D Q T G V L L K A L A - - - - - - - - G V P V A H I E G T K Y H L K S G H V T - C E V G L E - - - - K L K M K G L
- - - - - - - - - - - - - - - - G G Y E H V T V I P N T V G V P Y K T L V N R P G Y S P M V L E M E L L S V T L E P - T L S L D Y I T C - E Y K T V I P S P Y V K C C - - G T A E C K - - D K N L P D Y S C K V F T - - - - - G V Y P F M W G G A Y C F C D A E N T Q L S E A H V E K S E S C K T E F A S A Y R A H - - T A S A S A K L R V L Y Q - - - - - - - - - - - - - - - G N N I T V T A Y A N - G D H A V T V K D - A K F I V G P M S S A W T P F D N K I V V Y K - - - - - - - G D V Y N M D Y P P F G A G R P G Q F G D I Q S R T P E S K D V Y A N T - Q L V L Q R P A A G T V H V P Y S Q A P S G F K Y W L K E R G A S L Q H T A P F G C Q I A T N - - P V R A V N C A V G N M P I S I D I P E A A F T R V V D
F N C L G M G N R D F I E G A S G A T - - W V D L V L E G D S C L T I M A N - - - - - - D K P T L D V R M I N I E A S Q L A E V R S Y C Y H A S V T D I S T V A R C P T T G E A H N E K R A D S S Y V C K Q G F T D R G W G N - - - - - - - - - - G C G F F G K G S I D T C A K F S C T - - - - - S K A I G R T I Q P E N I K Y K V G I F V H G T T T S E N H G N Y S A Q V G A S Q A A K F T V T P N A P S V T L K L G D Y G E V T L D C E P R S G L N T E A F Y V M T V G S - - - - - - K S F L V H R E W F H D - - - - - L A L P W T S - P S S T A W R N R E L L M E F E G A H A T - - K Q S V V A L G S Q E G G L H Q A L A - - - - - - - - G A I V V E Y S - S S V M L T S G H L K - C R L K M D - - - - K L A L K G T

 

 

 

 

 

Member Chain UniProtKB GO term
d1svba2 A P14336 GO:0046983