Superfamily : 56831 [ Reovirus inner layer core protein p3 ]
Class : Multi-domain proteins (alpha and beta)
Fold : Reovirus inner layer core protein p3
# of Members : 2
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1uf2a-  (  50 )             qsvvs---rtPIplskigLqdVkkLfdInvIkCGSslrivd
d2btva-  (  57 )    vdftvpdvqqiLddIkalAaeqvYkivk-vPstsfrHivTqs--------
                                            bbb        bbb            

                             60        70        80        90        100 
d1uf2a-  (  88 )    epqVTFIVsyakdIydkFMcie-hdsayepsltmhrVrvIYsMLndyCAk
d2btva-  (  98 )    --rdrVLrVd--tYYeeMSqvGdvItedepekFYsTIIkKVrfIrgkGSf
                         bbbb      aaaa          aaaaaaaaaaaaaaaaa   b

                             110       120       130       140       150 
d1uf2a-  ( 137 )    mIseVpyessfvgelpvkSVtLnkLgdRnMdalAehllfehdvvnaqreN
d2btva-  ( 144 )    ILhdIpardhr----gmeVAepeVLG-VeFknVlpvL-taehramIqnal
                    bbb   bbbb      bbbb 333               aaaaaaaaaaa

                             160       170       180       190       200 
d1uf2a-  ( 187 )    rifYqrksApavpVifgddlepavreranlYhrYsVPYhqiELaLhalAn
d2btva-  ( 188 )    d-gsiIe---ngnva--------trd----VdvFiGAcSePiyrIYnrLQ
                                                  bbbbb    aaaaaaaaaaa

                             210       220       230       240       250 
d1uf2a-  ( 237 )    dLLsiQ-yC-HPtvvynylssraPn-FLrLddqvslkLtsAgigtLMprp
d2btva-  ( 222 )    gyIeaVQl-qelrnSigwLerLGqrKrItysqevltd-frrqdMIWVLal
                    aaaaaa     aaaaaaaaaa      bbb              bb    

                             260       270       280       290       300 
d1uf2a-  ( 284 )    vvqlldYdLVYmSPlALnnlAsrLlrki--slhlvmqmvtaVqqdLgevV
d2btva-  ( 270 )    qL-pVnpqVVwdVprSsiANliMNiATClPtGeyiapn-prissitLtqr
                                    aaaaaaaaaaa            aaaaaaa    

                             310       320       330       340       350 
d1uf2a-  ( 332 )    svssnvtnpAsaClvrMn-vqgVqtLAvFIAqSMLNPNIsyGmIsgltld
d2btva-  ( 318 )    i---tttGPF-ailtgstptaqqlnDVrkIYlALMFPgqIiLDlKidpge
                                       aaaaaaaaaaaaa       bb         

                             360       370       380       390       400 
d1uf2a-  ( 381 )    cFsnFiYGACLMLFQALIPPSA----LtArqRldINNrFAYFLIkCHAt-
d2btva-  ( 364 )    rmdpavrmVAGVVGHLLFTAGgrFTNLtqnMArqLDiALndYLlymyntr
                    3   aaaaaaaaaa              aaaaaaaaaaaaaaa       

                             410       420       430       440       450 
d1uf2a-  ( 426 )    -----qaTtarLvanqvIypvdaidqWqsngrdvLvaIynnLlpgelvLt
d2btva-  ( 414 )    vqvnygpt------------------------gepLdF--qIGr------
                                                                      

                             460       470       480       490       500 
d1uf2a-  ( 471 )    nLIqtYFrgntaqqAaeilipadqTsyganEtrALSAPYLfGapInmLap
d2btva-  ( 432 )    -----------------nqydCnvF----radfatGtGYNGwati---Dv
                                       b 333                          

                             510       520       530       540       550 
d1uf2a-  ( 521 )    darlstyKrdLaLPdrsPIlITtVe------------gqnsIsieNLrhK
d2btva-  ( 458 )    eyr-dpaPYv---HaqrYIrYCgIdSrelInpttyGi---gmtYhCYneM
                                                                 aaaaa

                             560       570       580       590       600 
d1uf2a-  ( 559 )    tgLIraMYlngFvtqPpawirnansNtaLLsrFLdaTpnLlGIYeaILan
d2btva-  ( 501 )    lrMLvaAgk-----------------dsEAaYFrsMlpfHMVRFArINqI
                    aaaaaa                    aaaaaaaa      aaaaaaaa  

                             610       620       630       640       650 
d1uf2a-  ( 609 )    tyAnaVNVYCDs----vYrAdIpieW------KlhqsVdPqdLLFGVFGI
d2btva-  ( 534 )    InedLhSVFslpDdmFnalLpdliagahqnadpvvldVswiSLWFAFnrS
                    aa                               bb       aaaaa   

                             660       670       680       690       700 
d1uf2a-  ( 649 )    vPqyqilnEavPdffaggedIlILqLIraVYdtLsnkLgrnPadifhlee
d2btva-  ( 584 )    FepthrnemLeiAPLiESVYASELSVMKvDMrhLslMqrrfp-dVLiqAr
                                      aaaaaaaaaaaaaaaaaaaa            

                             710       720       730       740       750 
d1uf2a-  ( 699 )    VFkvIeeIVsvLVqqkIdVrkYFtesmrsgsfSkprWdnFlrrpvaqrlP
d2btva-  ( 633 )    pshFwkAVlnd--Spe-aVkaVmnlShshnfInirdMmrWVllp--slQp
                    aaaaaaaaaaa       aaaa           aaaaaaaaa        

                             760       770       780       790       800 
d1uf2a-  ( 749 )    nLYsvImtqAdhVynyMtqlthiipitdcFYIVknSGfVdrGst-----g
d2btva-  ( 678 )    SLkLvLEeeAWaAAndFeDL----MLtdqVYMhrdmlpeprLddierfrq
                     aaaaaaaaaaaa                bbbb                 

                             810       820       830       840       850 
d1uf2a-  ( 794 )    p-vIASSSV----yenvLkvvhtIadfdaAnalrlqrrrvdntsytdsLs
d2btva-  ( 724 )    EGfyytNmleappeidrvvqYt----yeiArlqAnm----------gqFr
                                  333bbbb     aaaaaaaa              aa

                             860       870       880       890       900 
d1uf2a-  ( 839 )    dmfngLrsIssseFvrsvngrSvftegrIdAIkVnMrAkfdlqfitEeGg
d2btva-  ( 760 )    aalr-------riMdd-----------ddwVrFggvlRTVrVkffd----
                    aaaa       aaaa              bbbb     bbbbbbb     

                             910       920       930       940       950 
d1uf2a-  ( 889 )    yskppnVkklmfsdFlsfLdshk-------sdyrppLl-tVpITIGLNnl
d2btva-  ( 788 )    -------arPpddiLqglpfsydtnekgglsyatIkYatettIFYLiynV
                               aaaa                        bbbbbbb    

                             960       970       980       990       1000
d1uf2a-  ( 931 )    GetnsntlrmrseaideyFssYVgAqILVPinvvdtrvyteFseLRnfFt
d2btva-  ( 831 )    ef------sntpdslvl--inptyTmtkVfInkrIVerVr-VgqIlavln
                                              bb        bbb           

                             1010      1020      1030      1040
d1uf2a-  ( 981 )    gdvvird--dpfdvwdgvkatyipig---vhgVrLdpngdq
d2btva-  ( 872 )    rrFvAykgkmrImdITqsLkmgtklaaptv           
                     bbbbb      b        bbb                 

 

 

Domain IDNameFamilySourceDomainSTRING-DB
RDV p3Phytoreovirus coreRice dwarf virus [TaxId: 10991]view
BTV vp3Orbivirus coreBluetongue virus, strain 1 [TaxId: 40051]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

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- - - - - - - - - Q S V V S - - - R T P I P L S K I G L Q D V K K L F D I N V I K C G S S L R I V D E P Q V T F I V S Y A K D I Y D K F M C I E - H D S A Y E P S L T M H R V R V I Y S M L N D Y C A K M I S E V P Y E S S F V G E L P V K S V T L N K L G D R N M D A L A E H L L F E H D V V N A Q R E N R I F Y Q R K S A P A V P V I F G D D L E P A V R E R A N L Y H R Y S V P Y H Q I E L A L H A L A N D L L S I Q - Y C - H P T V V Y N Y L S S R A P N - F L R L D D Q V S L K L T S A G I G T L M P R P V V Q L L D Y D L V Y M S P L A L N N L A S R L L R K I - - S L H L V M Q M V T A V Q Q D L G E V V S V S S N V T N P A S A C L V R M N - V Q G V Q T L A V F I A Q S M L N P N I S Y G M I S G L T L D C F S N F I Y G A C L M L F Q A L I P P S A - - - - L T A R Q R L D I N N R F A Y F L I K C H A T - - - - - - Q A T T A R L V A N Q V I Y P V D A I D Q W Q S N G R D V L V A I Y N N L L P G E L V L T N L I Q T Y F R G N T A Q Q A A E I L I P A D Q T S Y G A N E T R A L S A P Y L F G A P I N M L A P D A R L S T Y K R D L A L P D R S P I L I T T V E - - - - - - - - - - - - G Q N S I S I E N L R H K T G L I R A M Y L N G F V T Q P P A W I R N A N S N T A L L S R F L D A T P N L L G I Y E A I L A N T Y A N A V N V Y C D S - - - - V Y R A D I P I E W - - - - - - K L H Q S V D P Q D L L F G V F G I V P Q Y Q I L N E A V P D F F A G G E D I L I L Q L I R A V Y D T L S N K L G R N P A D I F H L E E V F K V I E E I V S V L V Q Q K I D V R K Y F T E S M R S G S F S K P R W D N F L R R P V A Q R L P N L Y S V I M T Q A D H V Y N Y M T Q L T H I I P I T D C F Y I V K N S G F V D R G S T - - - - - G P - V I A S S S V - - - - Y E N V L K V V H T I A D F D A A N A L R L Q R R R V D N T S Y T D S L S D M F N G L R S I S S S E F V R S V N G R S V F T E G R I D A I K V N M R A K F D L Q F I T E E G G Y S K P P N V K K L M F S D F L S F L D S H K - - - - - - - S D Y R P P L L - T V P I T I G L N N L G E T N S N T L R M R S E A I D E Y F S S Y V G A Q I L V P I N V V D T R V Y T E F S E L R N F F T G D V V I R D - - D P F D V W D G V K A T Y I P I G - - - V H G V R L D P N G D Q
V D F T V P D V Q Q I L D D I K A L A A E Q V Y K I V K - V P S T S F R H I V T Q S - - - - - - - - - - R D R V L R V D - - T Y Y E E M S Q V G D V I T E D E P E K F Y S T I I K K V R F I R G K G S F I L H D I P A R D H R - - - - G M E V A E P E V L G - V E F K N V L P V L - T A E H R A M I Q N A L D - G S I I E - - - N G N V A - - - - - - - - T R D - - - - V D V F I G A C S E P I Y R I Y N R L Q G Y I E A V Q L - Q E L R N S I G W L E R L G Q R K R I T Y S Q E V L T D - F R R Q D M I W V L A L Q L - P V N P Q V V W D V P R S S I A N L I M N I A T C L P T G E Y I A P N - P R I S S I T L T Q R I - - - T T T G P F - A I L T G S T P T A Q Q L N D V R K I Y L A L M F P G Q I I L D L K I D P G E R M D P A V R M V A G V V G H L L F T A G G R F T N L T Q N M A R Q L D I A L N D Y L L Y M Y N T R V Q V N Y G P T - - - - - - - - - - - - - - - - - - - - - - - - G E P L D F - - Q I G R - - - - - - - - - - - - - - - - - - - - - - - N Q Y D C N V F - - - - R A D F A T G T G Y N G W A T I - - - D V E Y R - D P A P Y V - - - H A Q R Y I R Y C G I D S R E L I N P T T Y G I - - - G M T Y H C Y N E M L R M L V A A G K - - - - - - - - - - - - - - - - - D S E A A Y F R S M L P F H M V R F A R I N Q I I N E D L H S V F S L P D D M F N A L L P D L I A G A H Q N A D P V V L D V S W I S L W F A F N R S F E P T H R N E M L E I A P L I E S V Y A S E L S V M K V D M R H L S L M Q R R F P - D V L I Q A R P S H F W K A V L N D - - S P E - A V K A V M N L S H S H N F I N I R D M M R W V L L P - - S L Q P S L K L V L E E E A W A A A N D F E D L - - - - M L T D Q V Y M H R D M L P E P R L D D I E R F R Q E G F Y Y T N M L E A P P E I D R V V Q Y T - - - - Y E I A R L Q A N M - - - - - - - - - - G Q F R A A L R - - - - - - - R I M D D - - - - - - - - - - - D D W V R F G G V L R T V R V K F F D - - - - - - - - - - - A R P P D D I L Q G L P F S Y D T N E K G G L S Y A T I K Y A T E T T I F Y L I Y N V E F - - - - - - S N T P D S L V L - - I N P T Y T M T K V F I N K R I V E R V R - V G Q I L A V L N R R F V A Y K G K M R I M D I T Q S L K M G T K L A A P T V - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1uf2a_ A P22472 GO:0005198
d1uf2a_ A P22472 GO:0019028
d1uf2a_ A P22472 GO:0030430
d1uf2a_ A P22472 GO:0039624
d1uf2a_ A P17379 GO:0005198
d1uf2a_ A P17379 GO:0019028
d1uf2a_ A P17379 GO:0030430
d1uf2a_ A P17379 GO:0039624
d1uf2a_ A P22473 GO:0005198
d1uf2a_ A P22473 GO:0019028
d1uf2a_ A P22473 GO:0030430
d1uf2a_ A P22473 GO:0039624
d1uf2a_ A P22472 GO:0005198
d1uf2a_ A P22472 GO:0019028
d1uf2a_ A P22472 GO:0030430
d1uf2a_ A P22472 GO:0039624
d1uf2a_ A P17379 GO:0005198
d1uf2a_ A P17379 GO:0019028
d1uf2a_ A P17379 GO:0030430
d1uf2a_ A P17379 GO:0039624
d1uf2a_ A P22473 GO:0005198
d1uf2a_ A P22473 GO:0019028
d1uf2a_ A P22473 GO:0030430
d1uf2a_ A P22473 GO:0039624
d1uf2a_ A P22472 GO:0005198
d1uf2a_ A P22472 GO:0019028
d1uf2a_ A P22472 GO:0030430
d1uf2a_ A P22472 GO:0039624
d1uf2a_ A P17379 GO:0005198
d1uf2a_ A P17379 GO:0019028
d1uf2a_ A P17379 GO:0030430
d1uf2a_ A P17379 GO:0039624
d1uf2a_ A P22473 GO:0005198
d1uf2a_ A P22473 GO:0019028
d1uf2a_ A P22473 GO:0030430
d1uf2a_ A P22473 GO:0039624
d1uf2a_ A P22472 GO:0005198
d1uf2a_ A P22472 GO:0019028
d1uf2a_ A P22472 GO:0030430
d1uf2a_ A P22472 GO:0039624
d1uf2a_ A P17379 GO:0005198
d1uf2a_ A P17379 GO:0019028
d1uf2a_ A P17379 GO:0030430
d1uf2a_ A P17379 GO:0039624
d1uf2a_ A P22473 GO:0005198
d1uf2a_ A P22473 GO:0019028
d1uf2a_ A P22473 GO:0030430
d1uf2a_ A P22473 GO:0039624
d2btva_ A P56582 GO:0005198
d2btva_ A P56582 GO:0044423
d2btva_ A P18259 GO:0005198
d2btva_ A P18259 GO:0044423